RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 TUBA8Q9NY65 449 aaPredicted RBP9.42□□□□□ -0.9
CLPB-210ENST00000539148 LRFN1Q9P244 771 aa9.42□□□□□ -0.9
CLPB-210ENST00000539148 SLC35A3Q9Y2D2 325 aa9.42□□□□□ -0.9
CLPB-210ENST00000539148 DTX4Q9Y2E6 619 aa9.42□□□□□ -0.9
CLPB-210ENST00000539148 ORC6Q9Y5N6 252 aa9.42□□□□□ -0.9
CLPB-210ENST00000539148 WDFY3Q8IZQ1 3526 aa9.42□□□□□ -0.9
CLPB-210ENST00000539148 DSPP15924 2871 aaKnown RBP9.41□□□□□ -0.9
CLPB-210ENST00000539148 TRAV17A0A0B4J275 112 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 A0A1W2PQD3 144 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 ANKRD33BA6NCL7 494 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 FAM47E-STBD1D6RA91 191 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 KLRC4-KLRK1H3BQV0 150 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 GTPBP1O00178 669 aaKnown RBP9.41□□□□□ -0.9
CLPB-210ENST00000539148 KIAA0513O60268 411 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 TSPAN2O60636 221 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 TIPRLO75663 272 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 UTS2O95399 124 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 CDH2P19022 906 aaPredicted RBP9.41□□□□□ -0.9
CLPB-210ENST00000539148 MSX1P28360 303 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 KDELR2P33947 212 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 DCTP40126 519 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 SOX3P41225 446 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 ERFP50548 548 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 CASP9P55211 416 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 TUBA4AP68366 448 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 C17orf67Q0P5P2 114 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 SRSF6Q13247 344 aaKnown RBP9.41□□□□□ -0.9
CLPB-210ENST00000539148 IL18R1Q13478 541 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 ZNF141Q15928 474 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 SYPL1Q16563 259 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 ZNF791Q3KP31 576 aaPredicted RBP9.41□□□□□ -0.9
CLPB-210ENST00000539148 FIGNL1Q6PIW4 674 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 UGT2A3Q6UWM9 527 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 IL20RBQ6UXL0 311 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 NPSR1Q6W5P4 371 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 LINC00696Q6ZRV3 163 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 CCDC80Q76M96 950 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 EIF3MQ7L2H7 374 aaKnown RBP9.41□□□□□ -0.9
CLPB-210ENST00000539148 WDR53Q7Z5U6 358 aaPredicted RBP9.41□□□□□ -0.9
CLPB-210ENST00000539148 BEST3Q8N1M1 668 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 DHRSXQ8N5I4 330 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 ZNF614Q8N883 585 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 SIMC1Q8NDZ2 872 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 PSMF1Q92530 271 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 FIG4Q92562 907 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 SLC35B4Q969S0 331 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 EFHD2Q96C19 240 aaPredicted RBP9.41□□□□□ -0.9
CLPB-210ENST00000539148 PYURFQ96I23 114 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 SMAD5Q99717 465 aaKnown RBP9.41□□□□□ -0.9
CLPB-210ENST00000539148 RBM4BQ9BQ04 359 aaKnown RBP9.41□□□□□ -0.9
CLPB-210ENST00000539148 MESP1Q9BRJ9 268 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 RBM4Q9BWF3 364 aaKnown RBP9.41□□□□□ -0.9
CLPB-210ENST00000539148 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.41□□□□□ -0.9
CLPB-210ENST00000539148 SERHL2Q9H4I8 314 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 IKZF5Q9H5V7 419 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 PIF1Q9H611 641 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 SMPD3Q9NY59 655 aaPredicted RBP9.41□□□□□ -0.9
CLPB-210ENST00000539148 KLRF1Q9NZS2 232 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 MKLN1Q9UL63 735 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 SLC9A8Q9Y2E8 581 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 KLF13Q9Y2Y9 288 aaPredicted RBP9.41□□□□□ -0.9
CLPB-210ENST00000539148 PCDHGB6Q9Y5F9 930 aa9.41□□□□□ -0.9
CLPB-210ENST00000539148 CNTRLQ7Z7A1 2325 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 DSPPQ9NZW4 1301 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 GXYLT2A0PJZ3 443 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 PRAMEF25A6NGN4 478 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 AGAP5A6NIR3 686 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 TMEM200CA6NKL6 621 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 GNGT2O14610 69 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 SUV39H1O43463 412 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 NDUFB5O43674 189 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 PRKNO60260 465 aaPredicted RBP9.4□□□□□ -0.9
CLPB-210ENST00000539148 DNAJB5O75953 348 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 NADKO95544 446 aaPredicted RBP9.4□□□□□ -0.9
CLPB-210ENST00000539148 CELA2AP08217 269 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 CYP4B1P13584 511 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 NID1P14543 1247 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 ITGA2P17301 1181 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 MYF6P23409 242 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 ELAVL4P26378 380 aaKnown RBP9.4□□□□□ -0.9
CLPB-210ENST00000539148 ITPKBP27987 946 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 PRKAR1BP31321 381 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 TTKP33981 857 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 ADH7P40394 386 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 RPL5P46777 297 aaKnown RBP9.4□□□□□ -0.9
CLPB-210ENST00000539148 SLC6A8P48029 635 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 GZMMP51124 257 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 ALDH3A2P51648 485 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 RAD23AP54725 363 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 SELPLGQ14242 412 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 TBR1Q16650 682 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 KCTD21Q4G0X4 260 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 NHSL2Q5HYW2 709 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 ZNF311Q5JNZ3 666 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 CCNJQ5T5M9 372 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 FCRLBQ6BAA4 426 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 TYW3Q6IPR3 259 aaKnown RBP9.4□□□□□ -0.9
CLPB-210ENST00000539148 IGFL2Q6UWQ7 119 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 IGFL3Q6UXB1 125 aa9.4□□□□□ -0.9
CLPB-210ENST00000539148 PIWIL3Q7Z3Z3 882 aaKnown RBP9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms