RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 PLD2O14939 933 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 FOXS1O43638 330 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 COQ9O75208 318 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 WNT1P04628 370 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 HMGN1P05114 100 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 TBXA2RP21731 343 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 DRD5P21918 477 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 CD79BP40259 229 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 FASLGP48023 281 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 EMDP50402 254 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 ZNF155Q12901 538 aaPredicted RBP12.98□□□□□ -0.33
LIMK1-208ENST00000538333 SRSF5Q13243 272 aaKnown RBP12.98□□□□□ -0.33
LIMK1-208ENST00000538333 NXNL2Q5VZ03 156 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 GATAD2BQ8WXI9 593 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 SDHCQ99643 169 aaPredicted RBP12.98□□□□□ -0.33
LIMK1-208ENST00000538333 KCNS3Q9BQ31 491 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 RBCK1Q9BYM8 510 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 OR52D1Q9H346 318 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 SMURF1Q9HCE7 757 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 ATP13A2Q9NQ11 1180 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 HINT3Q9NQE9 182 aaKnown RBP12.98□□□□□ -0.33
LIMK1-208ENST00000538333 SIDT1Q9NXL6 827 aaKnown RBP12.98□□□□□ -0.33
LIMK1-208ENST00000538333 KLHL3Q9UH77 587 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 CBLCQ9ULV8 474 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 PCDHGB6Q9Y5F9 930 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 CLDN16Q9Y5I7 305 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 CSNK1G3Q9Y6M4 447 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 UNC119BA6NIH7 251 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 OR10H2O60403 315 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 IGHA1P01876 353 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 GUSBP08236 651 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 SRFP11831 508 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 FUT1P19526 365 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 HTR1FP30939 366 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 SLC1A3P43003 542 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 IGLV3-21P80748 117 aaPredicted RBP12.98□□□□□ -0.33
LIMK1-208ENST00000538333 PLK5Q496M5 336 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 AGAP7PQ5VUJ5 663 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 HSDL2Q6YN16 418 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 LAPTM4BQ86VI4 370 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 OR4F15Q8NGB8 312 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 TPSD1Q9BZJ3 242 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 ENKD1Q9H0I2 346 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 SP140LQ9H930 580 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 FOLH1BQ9HBA9 442 aa12.98□□□□□ -0.33
LIMK1-208ENST00000538333 CRNNQ9UBG3 495 aaPredicted RBP12.98□□□□□ -0.33
LIMK1-208ENST00000538333 YARS2Q9Y2Z4 477 aaKnown RBP12.98□□□□□ -0.33
LIMK1-208ENST00000538333 PNMA8CA0A1B0GUJ8 204 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 BHLHE40O14503 412 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 MBTPS2O43462 519 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 HRO43593 1189 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 SRPX2O60687 465 aaPredicted RBP12.97□□□□□ -0.33
LIMK1-208ENST00000538333 SOX30O94993 753 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 SNX4O95219 450 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 IGKV1D-16P01601 117 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 CSF2P04141 144 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 TSPAN19P0C672 248 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 GTF2E2P29084 291 aaKnown RBP12.97□□□□□ -0.33
LIMK1-208ENST00000538333 BMP8BP34820 402 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 CAPZBP47756 277 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 CD97P48960 835 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 RORCP51449 518 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 CDC20Q12834 499 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 SLC13A2Q13183 592 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 SPANXN2Q5MJ10 180 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 ZNF613Q6PF04 617 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 TMPRSS11FQ6ZWK6 438 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 ARL14Q8N4G2 192 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 TSTD1Q8NFU3 115 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 CNOT9Q92600 299 aaKnown RBP12.97□□□□□ -0.33
LIMK1-208ENST00000538333 ARSGQ96EG1 525 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 CD180Q99467 661 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 MAP3K3Q99759 626 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 CHRDQ9H2X0 955 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 HCN3Q9P1Z3 774 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 FBXL21Q9UKT6 434 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 PCDH15Q96QU1 1955 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 USP34Q70CQ2 3546 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 HRKO00198 91 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 LRRTM2O43300 516 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 ADAM11O75078 769 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 LALBAP00709 142 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 IL1AP01583 271 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 MSL3P1P0C860 447 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 IFI30P13284 250 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 RNH1P13489 461 aaKnown RBP12.97□□□□□ -0.33
LIMK1-208ENST00000538333 POU3F3P20264 500 aaPredicted RBP12.97□□□□□ -0.33
LIMK1-208ENST00000538333 TNFSF8P32971 234 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 GABRA4P48169 554 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 RPS25P62851 125 aaKnown RBP12.97□□□□□ -0.33
LIMK1-208ENST00000538333 PDZK1Q5T2W1 519 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 ZC3H14Q6PJT7 736 aaKnown RBP12.97□□□□□ -0.33
LIMK1-208ENST00000538333 LHFPL3Q86UP9 236 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 GRAMD2AQ8IUY3 354 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 CPOQ8IVL8 374 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 CADM3Q8N126 398 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 OR4N2Q8NGD1 307 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 FANK1Q8TC84 345 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 TMEM203Q969S6 136 aa12.97□□□□□ -0.33
LIMK1-208ENST00000538333 SLC25A46Q96AG3 418 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms