RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-208	ENST00000536710	ATP10D	Q9P241	1426 aa		4.18	□□□□□ -1.74
PRKDC-208	ENST00000536710	C15orf38-AP3S2	A0A0A6YYH1	394 aa		4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710		E9PLD3	99 aa		4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	SLC17A2	O00624	439 aa		4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	GPAA1	O43292	621 aa		4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	LRAT	O95237	230 aa		4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	PDHB	P11177	359 aa		4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	TBXA2R	P21731	343 aa		4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	CALB2	P22676	271 aa		4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	HPCAL1	P37235	193 aa		4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	DHPS	P49366	369 aa	Predicted RBP	4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	RND3	P61587	244 aa		4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	ST3GAL3	Q11203	375 aa		4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	KCNJ11	Q14654	390 aa		4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	TGIF1	Q15583	401 aa		4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	QRICH1	Q2TAL8	776 aa		4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	C10orf120	Q5SQS8	335 aa		4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	PMF1	Q6P1K2	205 aa		4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	LINC01561	Q8N1V8	128 aa		4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	SPATA3	Q8NHX4	192 aa		4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	AEN	Q8WTP8	325 aa	Known RBP	4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	SMPD3	Q9NY59	655 aa	Predicted RBP	4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	OARD1	Q9Y530	152 aa		4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	CSAG2	Q9Y5P2	127 aa		4.17	□□□□□ -1.74
PRKDC-208	ENST00000536710	CLRN2	A0PK11	232 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	MBLAC1	A4D2B0	266 aa	Predicted RBP	4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710		H3BMQ9	156 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	RIPK2	O43353	540 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	CD55	P08174	381 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	BCL3	P20749	454 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	HNF1A	P20823	631 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	GATA2	P23769	480 aa	Predicted RBP	4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	IL2RG	P31785	369 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	XCR1	P46094	333 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	PPT1	P50897	306 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	SLC25A1	P53007	311 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	ACTR1A	P61163	376 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	VLDLR	P98155	873 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	SYPL1	Q16563	259 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	GGTA1P	Q4G0N0	100 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	TCTEX1D4	Q5JR98	221 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	MARC1	Q5VT66	337 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	KDELC1	Q6UW63	502 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	ZNF683	Q8IZ20	524 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	SLC38A6	Q8IZM9	456 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	KIRREL3-AS3	Q8N7Y1	241 aa	Predicted RBP	4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	OR9A4	Q8NGU2	314 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	C1orf147	Q96MC9	270 aa	Predicted RBP	4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	C12orf66	Q96MD2	445 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	OR5B2	Q96R09	309 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	SLC6A7	Q99884	636 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	AIPL1	Q9NZN9	384 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	DPM3	Q9P2X0	92 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	LCMT1	Q9UIC8	334 aa		4.16	□□□□□ -1.74
PRKDC-208	ENST00000536710	N4BP1	O75113	896 aa	Known RBP	4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	CA1	P00915	261 aa	Predicted RBP	4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	PGC	P20142	388 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	TPSB2	P20231	275 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	SERPINA2	P20848	420 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	LIM2	P55344	173 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	ERVPABLB-1	P60509	514 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	HMGN5	P82970	282 aa	Known RBP	4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	CD47	Q08722	323 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	GPM6B	Q13491	265 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	ASAH1	Q13510	395 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	MXD4	Q14582	209 aa	Predicted RBP	4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	TPSAB1	Q15661	275 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	NDUFA9	Q16795	377 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	C15orf32	Q32M92	178 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	GLYR1	Q49A26	553 aa	Predicted RBP	4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	FAM120AOS	Q5T036	256 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	PVRIG	Q6DKI7	326 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	TMEM225	Q6GV28	225 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	C2orf66	Q6UXQ4	117 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	MYPOP	Q86VE0	399 aa	Predicted RBP	4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	CNPY4	Q8N129	248 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	MTURN	Q8N3F0	131 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	CLDN19	Q8N6F1	224 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	ANKFN1	Q8N957	763 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	SYT14	Q8NB59	555 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	PSMG2	Q969U7	264 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	EDEM2	Q9BV94	578 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	VCX2	Q9H322	139 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	ABCD2	Q9UBJ2	740 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	L3MBTL1	Q9Y468	752 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	PPIAL4A	Q9Y536	164 aa		4.15	□□□□□ -1.75
PRKDC-208	ENST00000536710	ATAD2B	Q9ULI0	1458 aa		4.14	□□□□□ -1.75
PRKDC-208	ENST00000536710	METTL21EP	A6NDL7	271 aa		4.14	□□□□□ -1.75
PRKDC-208	ENST00000536710	MSH4	O15457	936 aa		4.14	□□□□□ -1.75
PRKDC-208	ENST00000536710	SPAG6	O75602	509 aa		4.14	□□□□□ -1.75
PRKDC-208	ENST00000536710	DUSP14	O95147	198 aa	Known RBP	4.14	□□□□□ -1.75
PRKDC-208	ENST00000536710	PGK1	P00558	417 aa		4.14	□□□□□ -1.75
PRKDC-208	ENST00000536710	IGHD	P01880	384 aa		4.14	□□□□□ -1.75
PRKDC-208	ENST00000536710	ALOX5	P09917	674 aa		4.14	□□□□□ -1.75
PRKDC-208	ENST00000536710	IGHV1-2	P23083	117 aa		4.14	□□□□□ -1.75
PRKDC-208	ENST00000536710	PTGER3	P43115	390 aa		4.14	□□□□□ -1.75
PRKDC-208	ENST00000536710	AP3M2	P53677	418 aa		4.14	□□□□□ -1.75
PRKDC-208	ENST00000536710	CXCL6	P80162	114 aa		4.14	□□□□□ -1.75
PRKDC-208	ENST00000536710	IL24	Q13007	206 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms