RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 CCR7P32248 378 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 ACVRL1P37023 503 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 GDF5P43026 501 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 CRYBA2P53672 197 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 H2BFSP57053 126 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 MAXP61244 160 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 SEC61A1P61619 476 aaKnown RBP3.48□□□□□ -1.85
MCF2-210ENST00000536274 SPIBQ01892 262 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 TNFRSF9Q07011 255 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 SQSTM1Q13501 440 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 COL9A2Q14055 689 aaPredicted RBP3.48□□□□□ -1.85
MCF2-210ENST00000536274 PEA15Q15121 130 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 OR7A5Q15622 319 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 TSC22D1Q15714 1073 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 ELAVL1Q15717 326 aaKnown RBP3.48□□□□□ -1.85
MCF2-210ENST00000536274 TIGD5Q53EQ6 642 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 C3orf38Q5JPI3 329 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 TMEM31Q5JXX7 168 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 Q5PR19 223 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 TMEM201Q5SNT2 666 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 MLIPQ5VWP3 458 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 KCTD11Q693B1 232 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 DHRS7BQ6IAN0 325 aaPredicted RBP3.48□□□□□ -1.85
MCF2-210ENST00000536274 FAHD1Q6P587 224 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 ZNF549Q6P9A3 640 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 B3GNT9Q6UX72 402 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 CEACAM20Q6UY09 585 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 TPGS1Q6ZTW0 290 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 Q6ZVU0 165 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 RHOUQ7L0Q8 258 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 ABHD13Q7L211 337 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 LIMS2Q7Z4I7 341 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 HMGN2P46Q86SG4 172 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 GLB1L2Q8IW92 636 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 ETFBKMTQ8IXQ9 262 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 LGI4Q8N135 537 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 ATPAF2Q8N5M1 289 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 TCEANCQ8N8B7 351 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 POMGNT2Q8NAT1 580 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 UBAC2Q8NBM4 344 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 OR5J2Q8NH18 312 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 PAQR8Q8TEZ7 354 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 THAP3Q8WTV1 239 aaPredicted RBP3.48□□□□□ -1.85
MCF2-210ENST00000536274 ROBO4Q8WZ75 1007 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 MRPS31Q92665 395 aaKnown RBP3.48□□□□□ -1.85
MCF2-210ENST00000536274 BADQ92934 168 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 TSSK3Q96PN8 268 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 KLF16Q9BXK1 252 aaPredicted RBP3.48□□□□□ -1.85
MCF2-210ENST00000536274 PORCNQ9H237 461 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 SLC25A32Q9H2D1 315 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 XKR8Q9H6D3 395 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 TMEM185BQ9H7F4 350 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 NOX3Q9HBY0 568 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 NDUFB11Q9NX14 153 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 GPR52Q9Y2T5 361 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 GPR55Q9Y2T6 319 aaPredicted RBP3.48□□□□□ -1.85
MCF2-210ENST00000536274 USP3Q9Y6I4 520 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 SZT2Q5T011 3432 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 A0A1W2PRQ8 180 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 GPR39O43194 453 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 CYTIPO60759 359 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 PRAMEF2O60811 474 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 ECI2O75521 394 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 SCELO95171 688 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 CPSF4O95639 269 aaKnown RBP3.48□□□□□ -1.85
MCF2-210ENST00000536274 GASTP01350 101 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 HOXC4P09017 264 aaPredicted RBP3.48□□□□□ -1.85
MCF2-210ENST00000536274 QDPRP09417 244 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 INSRRP14616 1297 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 CPT2P23786 658 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 TACR1P25103 407 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 ID4P47928 161 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 NDUFV1P49821 464 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 ITGA1P56199 1179 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 NDUFA6P56556 154 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 NUTF2P61970 127 aaKnown RBP3.48□□□□□ -1.85
MCF2-210ENST00000536274 TIAL1Q01085 375 aaKnown RBP eCLIP3.48□□□□□ -1.85
MCF2-210ENST00000536274 IRF8Q02556 426 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 RSU1Q15404 277 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 MPPED2Q15777 294 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 RNF212Q495C1 297 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 MINDY4Q4G0A6 757 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 SPIN4Q56A73 249 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 FAM76BQ5HYJ3 339 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 RAB12Q6IQ22 244 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 CASP12Q6UXS9 341 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 RNF113BQ8IZP6 322 aaKnown RBP3.48□□□□□ -1.85
MCF2-210ENST00000536274 THEM5Q8N1Q8 247 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 SVBPQ8N300 66 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 PRSS35Q8N3Z0 413 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 FBXO39Q8N4B4 442 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 TOMM5Q8N4H5 51 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 TMEM163Q8TC26 289 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 RNF139Q8WU17 664 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 HIST1H2BAQ96A08 127 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 ORAI1Q96D31 301 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 JSRP1Q96MG2 331 aaPredicted RBP3.48□□□□□ -1.85
MCF2-210ENST00000536274 OR2M2Q96R28 347 aa3.48□□□□□ -1.85
MCF2-210ENST00000536274 TRMT61BQ9BVS5 477 aaKnown RBP3.48□□□□□ -1.85
MCF2-210ENST00000536274 FAIM2Q9BWQ8 316 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms