RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 CBFA2T3O75081 653 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 ALOX12BO75342 701 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 OR6B1O95007 311 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 NTN1O95631 604 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 IGFBP1P08833 259 aaPredicted RBP10.06□□□□□ -0.8
SRPRA-205ENST00000531104 ZNF806P0C7X5 589 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 GKN3PP0CG01 181 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 PCMT1P22061 227 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 FPR3P25089 353 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 FMO3P31513 532 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 CSTF2P33240 577 aaKnown RBP eCLIP10.06□□□□□ -0.8
SRPRA-205ENST00000531104 KRT20P35900 424 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 TSPAN7P41732 249 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 STAT5AP42229 794 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 SNRPGP62308 76 aaKnown RBP10.06□□□□□ -0.8
SRPRA-205ENST00000531104 PSPHP78330 225 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 EFNB1P98172 346 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 CDK5Q00535 292 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 ZBED5Q49AG3 693 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 TMEM201Q5SNT2 666 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 XAF1Q6GPH4 301 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 TMEM205Q6UW68 189 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 LINC00114Q6XXX2 140 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 ZNF730Q6ZMV8 503 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 WDR88Q6ZMY6 472 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 RASSF6Q6ZTQ3 369 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 LANCL3Q6ZV70 420 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 KCTD8Q6ZWB6 473 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 ZNF550Q7Z398 422 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 KIF18BQ86Y91 864 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 CCDC103Q8IW40 242 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 RNF113BQ8IZP6 322 aaKnown RBP10.06□□□□□ -0.8
SRPRA-205ENST00000531104 BPIFB6Q8NFQ5 453 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 OR4C3Q8NH37 302 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 WDR36Q8NI36 951 aaKnown RBP10.06□□□□□ -0.8
SRPRA-205ENST00000531104 PIGXQ8TBF5 258 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 FAM81AQ8TBF8 368 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 RHBDD1Q8TEB9 315 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 IPCEF1Q8WWN9 437 aaPredicted RBP10.06□□□□□ -0.8
SRPRA-205ENST00000531104 FGF11Q92914 225 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 TMIGD2Q96BF3 282 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 DGCR14Q96DF8 476 aaKnown RBP10.06□□□□□ -0.8
SRPRA-205ENST00000531104 LMF1Q96S06 567 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 SPSB2Q99619 263 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 TUBA1CQ9BQE3 449 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 ZNF426Q9BUY5 554 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 SLC7A5P2Q9GIP4 190 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 WWTR1Q9GZV5 400 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 WDR54Q9H977 334 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 SLC25A19Q9HC21 320 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 C11orf16Q9NQ32 467 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 FLRT3Q9NZU0 649 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 SLC7A7Q9UM01 511 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 TPRKBQ9Y3C4 175 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 OR10H1Q9Y4A9 318 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 CEPT1Q9Y6K0 416 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 R4GN57 208 aa10.06□□□□□ -0.8
SRPRA-205ENST00000531104 COL6A3P12111 3177 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 SDK1Q7Z5N4 2213 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 C2orf92A0A1B0GVN3 265 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 SAGE2PA6NJ88 616 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 IDSB3KWA1 339 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 MEN1O00255 615 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 XPNPEP2O43895 674 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 MPZL2O60487 215 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 CPNE3O75131 537 aaKnown RBP10.05□□□□□ -0.8
SRPRA-205ENST00000531104 HEXBP07686 556 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 NGFRP08138 427 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 TBXA2RP21731 343 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 CTBP2P56545 445 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 CDC42P60953 191 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 PRKCDQ05655 676 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 FOXD4Q12950 439 aaPredicted RBP10.05□□□□□ -0.8
SRPRA-205ENST00000531104 PMS2P3Q13401 168 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 NNATQ16517 81 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 SMN1Q16637 294 aaKnown RBP10.05□□□□□ -0.8
SRPRA-205ENST00000531104 SLC25A30Q5SVS4 291 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 TMEM236Q5W0B7 351 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 GTF2IRD2BQ6EKJ0 949 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 ZNF517Q6ZMY9 492 aaPredicted RBP10.05□□□□□ -0.8
SRPRA-205ENST00000531104 RBM44Q6ZP01 1051 aaKnown RBP10.05□□□□□ -0.8
SRPRA-205ENST00000531104 PRR23CQ6ZRP0 262 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 GTF2IRD2Q86UP8 949 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 ZNF440Q8IYI8 595 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 PRSS58Q8IYP2 241 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 CLDN22Q8N7P3 220 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 TMEM255BQ8WV15 326 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 TRUB1Q8WWH5 349 aaKnown RBP10.05□□□□□ -0.8
SRPRA-205ENST00000531104 ATOH1Q92858 354 aaPredicted RBP10.05□□□□□ -0.8
SRPRA-205ENST00000531104 TP53INP1Q96A56 240 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 HSPBAP1Q96EW2 488 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 WDR77Q9BQA1 342 aaPredicted RBP10.05□□□□□ -0.8
SRPRA-205ENST00000531104 TRIM2Q9C040 744 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 TMEM27Q9HBJ8 222 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 CCNB1IP1Q9NPC3 277 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 EXOSC3Q9NQT5 275 aaKnown RBP10.05□□□□□ -0.8
SRPRA-205ENST00000531104 UBQLN4Q9NRR5 601 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 RASSF1Q9NS23 344 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 SCN3BQ9NY72 215 aa10.05□□□□□ -0.8
SRPRA-205ENST00000531104 PSORS1C1Q9UIG5 152 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms