RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 SORCS1Q8WY21 1168 aa7.61□□□□□ -1.19
CSDE1-214ENST00000530886 TFGQ92734 400 aaPredicted RBP7.61□□□□□ -1.19
CSDE1-214ENST00000530886 MAP3K3Q99759 626 aa7.61□□□□□ -1.19
CSDE1-214ENST00000530886 MFFQ9GZY8 342 aa7.61□□□□□ -1.19
CSDE1-214ENST00000530886 ACKR4Q9NPB9 350 aa7.61□□□□□ -1.19
CSDE1-214ENST00000530886 FLVCR2Q9UPI3 526 aa7.61□□□□□ -1.19
CSDE1-214ENST00000530886 BRCA2P51587 3418 aa7.61□□□□□ -1.19
CSDE1-214ENST00000530886 ABHD14A-ACY1A0A1B0GW23 586 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 E9PI62 339 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 CLDN4O14493 209 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 FFAR1O14842 300 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 RNF13O43567 381 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 TLX2O43763 284 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-214ENST00000530886 PCDH7O60245 1069 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 CLDN9O95484 217 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 ASGR2P07307 311 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 OR12D1P0DN82 309 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 TIMP2P16035 220 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 ELAVL4P26378 380 aaKnown RBP7.6□□□□□ -1.19
CSDE1-214ENST00000530886 SOX18P35713 384 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 GDNFP39905 211 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 DGKGP49619 791 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 RAB5CP51148 216 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 SRSF4Q08170 494 aaKnown RBP7.6□□□□□ -1.19
CSDE1-214ENST00000530886 TDGQ13569 410 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 ZXDCQ2QGD7 858 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-214ENST00000530886 TIGD5Q53EQ6 642 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 PGBD2Q6P3X8 592 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 OR2W3Q7Z3T1 314 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 LNX2Q8N448 690 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 TEFMQ96QE5 360 aaKnown RBP7.6□□□□□ -1.19
CSDE1-214ENST00000530886 SSX3Q99909 188 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 TLNRD1Q9H1K6 362 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 REEP4Q9H6H4 257 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 UNKLQ9H9P5 680 aaKnown RBP7.6□□□□□ -1.19
CSDE1-214ENST00000530886 RDH14Q9HBH5 336 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 MIEF1Q9NQG6 463 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 ACSS1Q9NUB1 689 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-214ENST00000530886 TMEM100Q9NV29 134 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 UXTQ9UBK9 157 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-214ENST00000530886 ZNF69Q9UC07 566 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 PCDHB10Q9UN67 800 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 TRBV4-1A0A0J9YWV2 114 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 FAM86C2PA6NEL3 165 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 LOC730098B7Z3J9 87 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 AP4M1O00189 453 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 REM1O75628 298 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 MT-ND4LP03901 98 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 CD79AP11912 226 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 MAPK9P45984 424 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 MTNR1AP48039 350 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 CCR8P51685 355 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 H2BFSP57053 126 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 BLOC1S1P78537 153 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 CCINQ13939 588 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 NKPD1Q17RQ9 610 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 ZNF805Q5CZA5 627 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 MARC1Q5VT66 337 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 ANXA8L1Q5VT79 327 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 NOXRED1Q6NXP6 359 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 NHLRC1Q6VVB1 395 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 ABHD13Q7L211 337 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 SLC36A1Q7Z2H8 476 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 GPC2Q8N158 579 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 MAL2Q969L2 176 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 ZNF707Q96C28 371 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-214ENST00000530886 DUSP26Q9BV47 211 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 P2RY12Q9H244 342 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 TBC1D17Q9HA65 648 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 NOX3Q9HBY0 568 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 NT5MQ9NPB1 228 aa7.6□□□□□ -1.19
CSDE1-214ENST00000530886 PRDM5Q9NQX1 630 aaPredicted RBP7.6□□□□□ -1.19
CSDE1-214ENST00000530886 C2orf92A0A1B0GVN3 265 aa7.59□□□□□ -1.19
CSDE1-214ENST00000530886 GLTPD2A6NH11 291 aa7.59□□□□□ -1.19
CSDE1-214ENST00000530886 CD8B2A6NJW9 211 aa7.59□□□□□ -1.19
CSDE1-214ENST00000530886 ARPC1BO15143 372 aaKnown RBP7.59□□□□□ -1.19
CSDE1-214ENST00000530886 BCL2L11O43521 198 aa7.59□□□□□ -1.19
CSDE1-214ENST00000530886 TMEM127O75204 238 aa7.59□□□□□ -1.19
CSDE1-214ENST00000530886 NDUFB6O95139 128 aa7.59□□□□□ -1.19
CSDE1-214ENST00000530886 IFNW1P05000 195 aa7.59□□□□□ -1.19
CSDE1-214ENST00000530886 CD8BP10966 210 aa7.59□□□□□ -1.19
CSDE1-214ENST00000530886 CBR1P16152 277 aa7.59□□□□□ -1.19
CSDE1-214ENST00000530886 PNPLA4P41247 253 aa7.59□□□□□ -1.19
CSDE1-214ENST00000530886 CDKN1CP49918 316 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-214ENST00000530886 PNLIPRP2P54317 469 aa7.59□□□□□ -1.19
CSDE1-214ENST00000530886 RAB8AP61006 207 aa7.59□□□□□ -1.19
CSDE1-214ENST00000530886 SLC10A7Q0GE19 358 aa7.59□□□□□ -1.19
CSDE1-214ENST00000530886 SCARB2Q14108 478 aa7.59□□□□□ -1.19
CSDE1-214ENST00000530886 MELKQ14680 651 aa7.59□□□□□ -1.19
CSDE1-214ENST00000530886 MAPK14Q16539 360 aa7.59□□□□□ -1.19
CSDE1-214ENST00000530886 ZNF630Q2M218 657 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-214ENST00000530886 FBXO47Q5MNV8 452 aa7.59□□□□□ -1.19
CSDE1-214ENST00000530886 JMJD6Q6NYC1 403 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-214ENST00000530886 UBE2R2Q712K3 238 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-214ENST00000530886 PXKQ7Z7A4 578 aa7.59□□□□□ -1.19
CSDE1-214ENST00000530886 CIR1Q86X95 450 aaPredicted RBP7.59□□□□□ -1.19
CSDE1-214ENST00000530886 LINC00471Q8N535 108 aa7.59□□□□□ -1.19
CSDE1-214ENST00000530886 OR52N2Q8NGI0 321 aa7.59□□□□□ -1.19
CSDE1-214ENST00000530886 HIST1H2BAQ96A08 127 aa7.59□□□□□ -1.19
CSDE1-214ENST00000530886 WDR89Q96FK6 387 aaPredicted RBP7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms