RNA–Protein interactions for RNA: ENST00000525745.5

ECHDC1-218, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-218ENST00000525745 LOC110117498-PIK3R3F6TDL0 507 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 F8VP50 259 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 H3BMM5 538 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 GOLGA8SH3BPF8 625 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 GOLGA8RI6L899 631 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 EEF2KO00418 725 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 GAPDHSO14556 408 aaPredicted RBP2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 MRASO14807 208 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 AIM2O14862 343 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 CLOCKO15516 846 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 CFLARO15519 480 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 DPM1O60762 260 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 SCN2BO60939 215 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 UGT2B11O75310 529 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 ATP6V1G1O75348 118 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 CRLF1O75462 422 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 PRKRAO75569 313 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 CRCPO75575 148 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 GABARAPO95166 117 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 GBAP04062 536 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 EDN1P05305 212 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 RETP07949 1114 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 FGF4P08620 206 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 PRSS56P0CW18 603 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 SMIM18P0DKX4 95 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 ERVK-10P10266 1014 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 MBL2P11226 248 aaPredicted RBP2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 NCF1P14598 390 aaPredicted RBP2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 ITIH1P19827 911 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 HLA-DPA1P20036 260 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 M6PRP20645 277 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 OGNP20774 298 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 CYP3A5P20815 502 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 IMPDH1P20839 514 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 ZNF10P21506 573 aaPredicted RBP2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 CD9P21926 228 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 ACHEP22303 614 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 WARSP23381 471 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 EEF1B2P24534 225 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 CYP2F1P24903 491 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 HTR1EP28566 365 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 SLC6A6P31641 620 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 RFC2P35250 354 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 ARL2P36404 184 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 MATKP42679 507 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 TRPC1P48995 793 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 BCAP31P51572 246 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 PKNOX1P55347 436 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 TPI1P60174 286 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 HNRNPKP61978 463 aaKnown RBP eCLIP2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 RPS6P62753 249 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 HERVK_113P63132 956 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 DYNLT1P63172 113 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 MRPS22P82650 360 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 TFAMQ00059 246 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 IL1RL1Q01638 556 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 ACSM1Q08AH1 577 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 PNRC1Q12796 327 aaPredicted RBP2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 CDC20Q12834 499 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 MERTKQ12866 999 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 HSPB3Q12988 150 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 RPA4Q13156 261 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 RCAN2Q14206 197 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 FASTKD3Q14CZ7 662 aaKnown RBP2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 TAF13Q15543 124 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 TAB1Q15750 504 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 ATP6AP1Q15904 470 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 CLPPQ16740 277 aaPredicted RBP2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 TYSND1Q2T9J0 566 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 TMEM44Q2T9K0 475 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 PTPN20Q4JDL3 420 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 SLC39A12Q504Y0 691 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 HSD17B12Q53GQ0 312 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 LBHQ53QV2 105 aaPredicted RBP2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 ARMCX4Q5H9R4 360 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 TOR1AIP1Q5JTV8 583 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 SPANXN2Q5MJ10 180 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 BRMS1LQ5PSV4 323 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 ARMC4Q5T2S8 1044 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 CCNJQ5T5M9 372 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 ZNF544Q6NX49 715 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 ERICH5Q6P6B1 374 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 RFWD3Q6PCD5 774 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 GDPGP1Q6ZNW5 385 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 TMPRSS11FQ6ZWK6 438 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 PRSS48Q7RTY5 328 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 AKAP14Q86UN6 197 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 HPS6Q86YV9 775 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 CCDC60Q8IWA6 550 aaPredicted RBP2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 SLC30A8Q8IWU4 369 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 PEX5LQ8IYB4 626 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 CLYBLQ8N0X4 340 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 ZNF786Q8N393 782 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 STX19Q8N4C7 294 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 ATP6V0D2Q8N8Y2 350 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 NHLRC2Q8NBF2 726 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 TRPV3Q8NET8 790 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 OR10S1Q8NGN2 331 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 OR9Q1Q8NGQ5 310 aa2.35□□□□□ -2.03
ECHDC1-218ENST00000525745 C9orf43Q8TAL5 461 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms