RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 COMTD1Q86VU5 262 aa14.51□□□□□ -0.09
TSPAN4-213ENST00000524895 CARM1Q86X55 608 aa14.51□□□□□ -0.09
TSPAN4-213ENST00000524895 CLIP4Q8N3C7 705 aa14.51□□□□□ -0.09
TSPAN4-213ENST00000524895 VANGL1Q8TAA9 524 aaPredicted RBP14.51□□□□□ -0.09
TSPAN4-213ENST00000524895 PAQR8Q8TEZ7 354 aa14.51□□□□□ -0.09
TSPAN4-213ENST00000524895 PYDC1Q8WXC3 89 aa14.51□□□□□ -0.09
TSPAN4-213ENST00000524895 OSBPL11Q9BXB4 747 aa14.51□□□□□ -0.09
TSPAN4-213ENST00000524895 RSPO3Q9BXY4 272 aaPredicted RBP14.51□□□□□ -0.09
TSPAN4-213ENST00000524895 RNF32Q9H0A6 362 aa14.51□□□□□ -0.09
TSPAN4-213ENST00000524895 TIMMDC1Q9NPL8 285 aa14.51□□□□□ -0.09
TSPAN4-213ENST00000524895 RLIMQ9NVW2 624 aa14.51□□□□□ -0.09
TSPAN4-213ENST00000524895 PLA2G3Q9NZ20 509 aa14.51□□□□□ -0.09
TSPAN4-213ENST00000524895 CNIH4Q9P003 139 aa14.51□□□□□ -0.09
TSPAN4-213ENST00000524895 CELSR3Q9NYQ7 3312 aa14.51□□□□□ -0.09
TSPAN4-213ENST00000524895 ACACAQ13085 2346 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 OR5H15A6NDH6 313 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 M0R3H8 397 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 CYP7B1O75881 506 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 EPPINO95925 133 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 LGI1O95970 557 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 P04436 131 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 IFNW1P05000 195 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 UBTFL6P0CB48 400 aaPredicted RBP14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 RAP2AP10114 183 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 CCL3P10147 92 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 SLC7A1P30825 629 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 ADH7P40394 386 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 CASP3P42574 277 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 OR1E2P47887 323 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 RGS8P57771 180 aaPredicted RBP14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 KCNC4Q03721 635 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 SNTA1Q13424 505 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 OR1C1Q15619 314 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 PRAMEF20Q5VT98 475 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 FNDC7Q5VTL7 733 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 BICRALQ6AI39 1079 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 ZFP1Q6P2D0 407 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 TMEM81Q6P7N7 255 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 MDGA2Q7Z553 956 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 MISPQ8IVT2 679 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 TMCO5AQ8N6Q1 288 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 PSD4Q8NDX1 1056 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 RNF138Q8WVD3 245 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 CNOT9Q92600 299 aaKnown RBP14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 ARHGDIGQ99819 225 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 EVA1AQ9H8M9 152 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 GALNT9Q9HCQ5 603 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 SH2D2AQ9NP31 389 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 SDHAF3Q9NRP4 125 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 SACM1LQ9NTJ5 587 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 CCM2LQ9NUG4 571 aaPredicted RBP14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 DNAJB12Q9NXW2 375 aaKnown RBP14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 CNOT11Q9UKZ1 510 aaKnown RBP14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 CHST2Q9Y4C5 530 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 WIF1Q9Y5W5 379 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 DOCK10Q96BY6 2186 aa14.5□□□□□ -0.09
TSPAN4-213ENST00000524895 ZNF264O43296 627 aa14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 FRS3O43559 492 aa14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 FKBP6O75344 327 aa14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 SLC25A12O75746 678 aa14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 SEMG1P04279 462 aa14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 FABP3P05413 133 aa14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 TBR1Q16650 682 aa14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 NRF1Q16656 503 aa14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 NDUFAF6Q330K2 333 aa14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 SPINK14Q6IE38 97 aa14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 SLC30A6Q6NXT4 461 aa14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 GRAMD2AQ8IUY3 354 aa14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 KDF1Q8NAX2 398 aaPredicted RBP14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 TM9SF4Q92544 642 aa14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 SLCO4A1Q96BD0 722 aa14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 DUS3LQ96G46 650 aaKnown RBP14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 SH3YL1Q96HL8 342 aaPredicted RBP14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 SIGLEC12Q96PQ1 595 aa14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 RTN4RQ9BZR6 473 aa14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.49□□□□□ -0.093e-7■■■■■ 28.3
TSPAN4-213ENST00000524895 YY1AP1Q9H869 796 aa14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 HHATLQ9HCP6 504 aa14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 PPP4R1LQ9P1A2 415 aa14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 CARD8Q9Y2G2 431 aa14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 AP4S1Q9Y587 144 aa14.49□□□□□ -0.09
TSPAN4-213ENST00000524895 MKRN2OSH3BPM6 223 aa14.48□□□□□ -0.09
TSPAN4-213ENST00000524895 hCG_2039718K7EN88 272 aa14.48□□□□□ -0.09
TSPAN4-213ENST00000524895 HCRTR2O43614 444 aa14.48□□□□□ -0.09
TSPAN4-213ENST00000524895 EIF4E2O60573 245 aaKnown RBP14.48□□□□□ -0.09
TSPAN4-213ENST00000524895 BCAS1O75363 584 aaPredicted RBP14.48□□□□□ -0.09
TSPAN4-213ENST00000524895 KRT36O76013 467 aa14.48□□□□□ -0.09
TSPAN4-213ENST00000524895 NEURL1O76050 574 aa14.48□□□□□ -0.09
TSPAN4-213ENST00000524895 MT-ND1P03886 318 aa14.48□□□□□ -0.09
TSPAN4-213ENST00000524895 ITGA2P17301 1181 aa14.48□□□□□ -0.09
TSPAN4-213ENST00000524895 PTGDSP41222 190 aa14.48□□□□□ -0.09
TSPAN4-213ENST00000524895 CCR4P51679 360 aa14.48□□□□□ -0.09
TSPAN4-213ENST00000524895 GAS1P54826 345 aa14.48□□□□□ -0.09
TSPAN4-213ENST00000524895 PLAURQ03405 335 aa14.48□□□□□ -0.09
TSPAN4-213ENST00000524895 ZNF117Q03924 483 aa14.48□□□□□ -0.09
TSPAN4-213ENST00000524895 C17orf67Q0P5P2 114 aa14.48□□□□□ -0.09
TSPAN4-213ENST00000524895 SKP2Q13309 424 aa14.48□□□□□ -0.09
TSPAN4-213ENST00000524895 IGFL2Q6UWQ7 119 aa14.48□□□□□ -0.09
TSPAN4-213ENST00000524895 DEF8Q6ZN54 512 aa14.48□□□□□ -0.09
TSPAN4-213ENST00000524895 ZNF550Q7Z398 422 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms