RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 CARM1Q86X55 608 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 GPALPP1Q8IXQ4 340 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 AMER2Q8N7J2 671 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 FAM71CQ8NEG0 241 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 HGDQ93099 445 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 SPACA9Q96E40 222 aaPredicted RBP12□□□□□ -0.49
CPNE3-205ENST00000522240 ZNF347Q96SE7 839 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 LHPPQ9H008 270 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 LIN28AQ9H9Z2 209 aaKnown RBP12□□□□□ -0.49
CPNE3-205ENST00000522240 AGPAT4Q9NRZ5 378 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 POLHQ9Y253 713 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 SH3GLB1Q9Y371 365 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 CHST2Q9Y4C5 530 aa12□□□□□ -0.49
CPNE3-205ENST00000522240 SERINC4A6NH21 518 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 ALG1L2C9J202 215 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 H3BNH8 94 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 ZNF354AO60765 605 aaPredicted RBP11.99□□□□□ -0.49
CPNE3-205ENST00000522240 DNAJB5O75953 348 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 LDLRP01130 860 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 HPGDP15428 266 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 TNFRSF1BP20333 461 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 EVI2BP34910 448 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 SOX8P57073 446 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 RGS8P57771 180 aaPredicted RBP11.99□□□□□ -0.49
CPNE3-205ENST00000522240 RPP38P78345 283 aaKnown RBP11.99□□□□□ -0.49
CPNE3-205ENST00000522240 PLAURQ03405 335 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 SLC34A1Q06495 639 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 SRSF6Q13247 344 aaKnown RBP11.99□□□□□ -0.49
CPNE3-205ENST00000522240 GK3PQ14409 553 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 MEP1AQ16819 746 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 ZNF791Q3KP31 576 aaPredicted RBP11.99□□□□□ -0.49
CPNE3-205ENST00000522240 IQCCQ4KMZ1 466 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 C16orf47Q6ZP98 133 aaPredicted RBP11.99□□□□□ -0.49
CPNE3-205ENST00000522240 HMGN2P46Q86SG4 172 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 COMTD1Q86VU5 262 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 MISPQ8IVT2 679 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 ZNF440Q8IYI8 595 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 LILRA2Q8N149 483 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 ZNF614Q8N883 585 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 POGLUT1Q8NBL1 392 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 OR4C3Q8NH37 302 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 BRIX1Q8TDN6 353 aaKnown RBP11.99□□□□□ -0.49
CPNE3-205ENST00000522240 ASB15Q8WXK1 588 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 LRTOMTQ8WZ04 291 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 NR4A3Q92570 626 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 TMCO6Q96DC7 493 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 THOC3Q96J01 351 aaKnown RBP11.99□□□□□ -0.49
CPNE3-205ENST00000522240 ZNF300Q96RE9 604 aaPredicted RBP11.99□□□□□ -0.49
CPNE3-205ENST00000522240 CCNL2Q96S94 520 aaPredicted RBP11.99□□□□□ -0.49
CPNE3-205ENST00000522240 SECISBP2Q96T21 854 aaKnown RBP11.99□□□□□ -0.49
CPNE3-205ENST00000522240 PKP2Q99959 881 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 POLR2J2Q9GZM3 115 aaKnown RBP11.99□□□□□ -0.49
CPNE3-205ENST00000522240 POLR2J3Q9H1A7 115 aaKnown RBP11.99□□□□□ -0.49
CPNE3-205ENST00000522240 CDCP1Q9H5V8 836 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 HHATLQ9HCP6 504 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 NDUFAF4Q9P032 175 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 STOML1Q9UBI4 398 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 NKX1-2Q9UD57 310 aaPredicted RBP11.99□□□□□ -0.49
CPNE3-205ENST00000522240 TEKT2Q9UIF3 430 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 ENPP4Q9Y6X5 453 aa11.99□□□□□ -0.49
CPNE3-205ENST00000522240 HELZ2Q9BYK8 2649 aaKnown RBP11.99□□□□□ -0.49
CPNE3-205ENST00000522240 GCN1Q92616 2671 aaKnown RBP11.99□□□□□ -0.49
CPNE3-205ENST00000522240 FLNBO75369 2602 aaKnown RBP11.98□□□□□ -0.49
CPNE3-205ENST00000522240 CPAMD8Q8IZJ3 1885 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 PRAMEF25A6NGN4 478 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 hCG_2039718K7EN88 272 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 M0R3H8 397 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 CASQ2O14958 399 aaPredicted RBP11.98□□□□□ -0.49
CPNE3-205ENST00000522240 ADAMDEC1O15204 470 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 CLOCKO15516 846 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 FMO6PO60774 539 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 PRSS23O95084 383 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 BAG2O95816 211 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 CST1P01037 141 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 MT-ND1P03886 318 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 CAPNS1P04632 268 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 RHCEP18577 417 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 WT1P19544 449 aaPredicted RBP11.98□□□□□ -0.49
CPNE3-205ENST00000522240 SOX3P41225 446 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 OR1E2P47887 323 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 ATP1A1-AS1Q5TC04 95 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 TSEN54Q7Z6J9 526 aaKnown RBP11.98□□□□□ -0.49
CPNE3-205ENST00000522240 CLIP4Q8N3C7 705 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 PSMF1Q92530 271 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 CENPNQ96H22 339 aaPredicted RBP11.98□□□□□ -0.49
CPNE3-205ENST00000522240 BDH2Q9BUT1 245 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 TBL1XR1Q9BZK7 514 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 AMBRA1Q9C0C7 1298 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 CCDC86Q9H6F5 360 aaKnown RBP11.98□□□□□ -0.49
CPNE3-205ENST00000522240 EXOSC3Q9NQT5 275 aaKnown RBP11.98□□□□□ -0.49
CPNE3-205ENST00000522240 DNAJB12Q9NXW2 375 aaKnown RBP11.98□□□□□ -0.49
CPNE3-205ENST00000522240 FLRT3Q9NZU0 649 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 ABI3Q9P2A4 366 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 DNAJB9Q9UBS3 223 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 TESQ9UGI8 421 aaKnown RBP11.98□□□□□ -0.49
CPNE3-205ENST00000522240 ACAD8Q9UKU7 415 aa11.98□□□□□ -0.49
CPNE3-205ENST00000522240 SMG1Q96Q15 3661 aaKnown RBP11.98□□□□□ -0.49
CPNE3-205ENST00000522240 CLDN24A6NM45 220 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 MASP2O00187 686 aa11.97□□□□□ -0.49
CPNE3-205ENST00000522240 TP53I11O14683 189 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms