RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 ABCA2Q9BZC7 2435 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 C7orf72A4D263 438 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 TMEM233B4DJY2 109 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 SCDO00767 359 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 TNFSF11O14788 317 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 CXCL13O43927 109 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 TRIM13O60858 407 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 SS18L1O75177 396 aaPredicted RBP13.59□□□□□ -0.23
CSMD1-207ENST00000520451 BCKDHAP12694 445 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 ME2P23368 584 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 LOXP28300 417 aaPredicted RBP13.59□□□□□ -0.23
CSMD1-207ENST00000520451 LCN1P31025 176 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 SERPINB4P48594 390 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 RAC1P63000 192 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 CTU2Q2VPK5 515 aaKnown RBP13.59□□□□□ -0.23
CSMD1-207ENST00000520451 CCNJQ5T5M9 372 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 CPTPQ5TA50 214 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 ZCCHC12Q6PEW1 402 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 C20orf204Q6ZNR8 217 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 R3HCC1LQ7Z5L2 792 aaKnown RBP13.59□□□□□ -0.23
CSMD1-207ENST00000520451 MISPQ8IVT2 679 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 EIF1ADQ8N9N8 165 aaKnown RBP13.59□□□□□ -0.23
CSMD1-207ENST00000520451 OR2V1Q8NHB1 315 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 ACTRT2Q8TDY3 377 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 TWIST2Q8WVJ9 160 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 PERPQ96FX8 193 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 CHMP6Q96FZ7 201 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 ADGRG7Q96K78 797 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 PLSCR4Q9NRQ2 329 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 UBQLN4Q9NRR5 601 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 ZCCHC3Q9NUD5 404 aaKnown RBP13.59□□□□□ -0.23
CSMD1-207ENST00000520451 NSD1Q96L73 2696 aaPredicted RBP13.59□□□□□ -0.23
CSMD1-207ENST00000520451 ARID1AO14497 2285 aa13.59□□□□□ -0.23
CSMD1-207ENST00000520451 A0A0J9YW62 118 aa13.58□□□□□ -0.24
CSMD1-207ENST00000520451 ADAMDEC1O15204 470 aa13.58□□□□□ -0.24
CSMD1-207ENST00000520451 PPP3CBP16298 524 aa13.58□□□□□ -0.24
CSMD1-207ENST00000520451 DDX5P17844 614 aaKnown RBP13.58□□□□□ -0.24
CSMD1-207ENST00000520451 PSMA4P25789 261 aaKnown RBP13.58□□□□□ -0.24
CSMD1-207ENST00000520451 HPCAL1P37235 193 aa13.58□□□□□ -0.24
CSMD1-207ENST00000520451 PRIM2P49643 509 aa13.58□□□□□ -0.24
CSMD1-207ENST00000520451 POU6F2P78424 691 aaPredicted RBP13.58□□□□□ -0.24
CSMD1-207ENST00000520451 CD226Q15762 336 aa13.58□□□□□ -0.24
CSMD1-207ENST00000520451 HBMQ6B0K9 141 aa13.58□□□□□ -0.24
CSMD1-207ENST00000520451 ESPNLQ6ZVH7 1005 aa13.58□□□□□ -0.24
CSMD1-207ENST00000520451 B4GALNT2Q8NHY0 566 aa13.58□□□□□ -0.24
CSMD1-207ENST00000520451 MTERF3Q96E29 417 aa13.58□□□□□ -0.24
CSMD1-207ENST00000520451 FAM120BQ96EK7 910 aaKnown RBP13.58□□□□□ -0.24
CSMD1-207ENST00000520451 Q96MF0 132 aa13.58□□□□□ -0.24
CSMD1-207ENST00000520451 KLHDC3Q9BQ90 382 aa13.58□□□□□ -0.24
CSMD1-207ENST00000520451 BTBD2Q9BX70 525 aa13.58□□□□□ -0.24
CSMD1-207ENST00000520451 SIRT3Q9NTG7 399 aaPredicted RBP13.58□□□□□ -0.24
CSMD1-207ENST00000520451 SNX8Q9Y5X2 465 aa13.58□□□□□ -0.24
CSMD1-207ENST00000520451 A0A1W2PQD3 144 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 TLDC2A0PJX2 215 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 FAM171A2A8MVW0 826 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 TMEM114B3SHH9 223 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 H7C1Q1 480 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 PIP5K1BO14986 540 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 SCAMP2O15127 329 aaKnown RBP13.57□□□□□ -0.24
CSMD1-207ENST00000520451 HSPA4LO95757 839 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 HMGN2P05204 90 aaKnown RBP13.57□□□□□ -0.24
CSMD1-207ENST00000520451 HEXAP06865 529 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 THBDP07204 575 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 CHRNGP07510 517 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 ALDH3A1P30838 453 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 LASP1Q14847 261 aaKnown RBP13.57□□□□□ -0.24
CSMD1-207ENST00000520451 ARL13AQ5H913 290 aaPredicted RBP13.57□□□□□ -0.24
CSMD1-207ENST00000520451 BEX5Q5H9J7 111 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 EXOSC6Q5RKV6 272 aaKnown RBP13.57□□□□□ -0.24
CSMD1-207ENST00000520451 PDSS1Q5T2R2 415 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 LRIG3Q6UXM1 1119 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 STAC2Q6ZMT1 411 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 YTHDF3Q7Z739 585 aaKnown RBP13.57□□□□□ -0.24
CSMD1-207ENST00000520451 STK32CQ86UX6 486 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 OR7A2PQ8NGA2 310 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 POC1BQ8TC44 478 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 CDS1Q92903 461 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 APOPT1Q96IL0 206 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 COX4I2Q96KJ9 171 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 FANCFQ9NPI8 374 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 DUSP22Q9NRW4 184 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 GLRX2Q9NS18 164 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 GIN1Q9NXP7 522 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 GIMAP2Q9UG22 337 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 ATP6V1HQ9UI12 483 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 TRAF6Q9Y4K3 522 aa13.57□□□□□ -0.24
CSMD1-207ENST00000520451 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.56□□□□□ -0.24
CSMD1-207ENST00000520451 NPHS1O60500 1241 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 FGF4P08620 206 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 IL11P20809 199 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 ATP6V1C1P21283 382 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 MAPK1P28482 360 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 SFTPDP35247 375 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 RPL3P39023 403 aaKnown RBP13.56□□□□□ -0.24
CSMD1-207ENST00000520451 EIF1P41567 113 aaKnown RBP13.56□□□□□ -0.24
CSMD1-207ENST00000520451 RNF144AP50876 292 aaPredicted RBP13.56□□□□□ -0.24
CSMD1-207ENST00000520451 ZNF117Q03924 483 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 FOXF1Q12946 379 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 MLC1Q15049 377 aa13.56□□□□□ -0.24
CSMD1-207ENST00000520451 UGT3A2Q3SY77 523 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms