RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 OR4F3Q6IEY1 312 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 CDC73Q6P1J9 531 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 TUBA1AQ71U36 451 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 C6orf120Q7Z4R8 191 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 CAMKMTQ7Z624 323 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 FBXO30Q8TB52 745 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 ZNF75CPQ92670 426 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-215ENST00000519474 C1GALT1C1Q96EU7 318 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 SFXN2Q96NB2 322 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 MS4A4EQ96PG1 132 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 STACQ99469 402 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 NPAS1Q99742 590 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 BTBD2Q9BX70 525 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 ACTRT3Q9BYD9 372 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 TBL1XR1Q9BZK7 514 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 BHLHE41Q9C0J9 482 aaPredicted RBP8.44□□□□□ -1.06
HDAC3-215ENST00000519474 PTGES2Q9H7Z7 377 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 TMBIM4Q9HC24 238 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 UBQLN4Q9NRR5 601 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 DUSP22Q9NRW4 184 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 ZCCHC3Q9NUD5 404 aaKnown RBP8.44□□□□□ -1.06
HDAC3-215ENST00000519474 ATAD3AQ9NVI7 634 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 NOP53Q9NZM5 478 aaKnown RBP8.44□□□□□ -1.06
HDAC3-215ENST00000519474 KCNN3Q9UGI6 736 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 DKKL1Q9UK85 242 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 SNX8Q9Y5X2 465 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 NOTCH2Q04721 2471 aa8.44□□□□□ -1.06
HDAC3-215ENST00000519474 MPDZO75970 2070 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 CELSR2Q9HCU4 2923 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 ENO4A6NNW6 628 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 SHISA8B8ZZ34 492 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 LINC01387J3KSC0 135 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 M0QX08 132 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 CFLARO15519 480 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 HCRTR2O43614 444 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 NDUFB5O43674 189 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 GMFGO60234 142 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 TNFRSF21O75509 655 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 SOX30O94993 753 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 TMIGD3P0DMS9 266 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-215ENST00000519474 IDO1P14902 403 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 LBPP18428 481 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 MATN1P21941 496 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 LCN1P31025 176 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 OPRM1P35372 400 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 DGKQP52824 942 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 SLC18A1P54219 525 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 CLDN20P56880 219 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 KLHL26Q53HC5 615 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 SZRD1Q7Z422 152 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 WDR75Q8IWA0 830 aaKnown RBP8.43□□□□□ -1.06
HDAC3-215ENST00000519474 CLECL1Q8IZS7 167 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 CLEC4FQ8N1N0 589 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 ANKRD42Q8N9B4 389 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 OR8J2Q8NGG1 315 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 GOT1L1Q8NHS2 421 aaPredicted RBP8.43□□□□□ -1.06
HDAC3-215ENST00000519474 ADAMTS15Q8TE58 950 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 FIG4Q92562 907 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 CDS1Q92903 461 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 RNASE6Q93091 150 aaKnown RBP8.43□□□□□ -1.06
HDAC3-215ENST00000519474 INTS12Q96CB8 462 aaKnown RBP8.43□□□□□ -1.06
HDAC3-215ENST00000519474 TLCD1Q96CP7 247 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 TEX37Q96LM6 180 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 TM9SF2Q99805 663 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 ZNF559Q9BR84 538 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 NUF2Q9BZD4 464 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 DPY30Q9C005 99 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 MEAF6Q9HAF1 191 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 UBAP1Q9NZ09 502 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 UNC79Q9P2D8 2635 aa8.43□□□□□ -1.06
HDAC3-215ENST00000519474 NPIPA5A0A0B4J1W7 369 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 A0A0B4J203 849 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 PRSS51A0A1B0GVH4 220 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 A0A1W2PQD3 144 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 TMEM120BA0PK00 339 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 A8MXE2 369 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 NPIPA7E9PJI5 369 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 RNASET2O00584 256 aaKnown RBP8.42□□□□□ -1.06
HDAC3-215ENST00000519474 SDHDO14521 159 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 EFNA2O43921 213 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 DIAPH2O60879 1101 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 SNNO75324 88 aaPredicted RBP8.42□□□□□ -1.06
HDAC3-215ENST00000519474 CTAG2O75638 210 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 RPSAP08865 295 aaKnown RBP8.42□□□□□ -1.06
HDAC3-215ENST00000519474 NPIPA8P0DM63 369 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 PSMA4P25789 261 aaKnown RBP8.42□□□□□ -1.06
HDAC3-215ENST00000519474 IL12AP29459 219 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 UQCRC1P31930 480 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 KIR2DL3P43628 341 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 ASCL1P50553 236 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 MAGOHP61326 146 aaKnown RBP8.42□□□□□ -1.06
HDAC3-215ENST00000519474 MRPL28Q13084 256 aaKnown RBP8.42□□□□□ -1.06
HDAC3-215ENST00000519474 TP53BP2Q13625 1128 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 GANABQ14697 944 aaKnown RBP8.42□□□□□ -1.06
HDAC3-215ENST00000519474 CASP8Q14790 479 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 CD226Q15762 336 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 RAET1LQ5VY80 246 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 NXNQ6DKJ4 435 aa8.42□□□□□ -1.06
HDAC3-215ENST00000519474 FIP1L1Q6UN15 594 aaKnown RBP8.42□□□□□ -1.06
HDAC3-215ENST00000519474 UBQLNLQ8IYU4 475 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms