RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 CHD3Q12873 2000 aaKnown RBP16.41■□□□□ 0.22
SPOP-220ENST00000515508 A0A1W2PQD3 144 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 GLRA3O75311 464 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 CRCPO75575 148 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 KCNK2O95069 426 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 UROSP10746 265 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 ACP2P11117 423 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 ME2P23368 584 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 GPC1P35052 558 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 ZNF41P51814 821 aaPredicted RBP16.41■□□□□ 0.22
SPOP-220ENST00000515508 EXOSC6Q5RKV6 272 aaKnown RBP16.41■□□□□ 0.22
SPOP-220ENST00000515508 HBMQ6B0K9 141 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 ANKRD26P1Q6NSI1 321 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 MFSD12Q6NUT3 480 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 ADAM5Q6NVV9 412 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 TRABD2AQ86V40 505 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 GATSQ8NAP1 163 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 SLC16A11Q8NCK7 471 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 MNS1Q8NEH6 495 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 NUP43Q8NFH3 380 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 ZFP28Q8NHY6 868 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 POC1BQ8TC44 478 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 RNF128Q8TEB7 428 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 ZBED6CLQ96FA7 236 aaPredicted RBP16.41■□□□□ 0.22
SPOP-220ENST00000515508 KLHL15Q96M94 604 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 CCT7Q99832 543 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 TMEM185BQ9H7F4 350 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 UBQLN4Q9NRR5 601 aa16.41■□□□□ 0.22
SPOP-220ENST00000515508 SEC22BO75396 215 aa16.4■□□□□ 0.22
SPOP-220ENST00000515508 CRLF1O75462 422 aa16.4■□□□□ 0.22
SPOP-220ENST00000515508 GCM2O75603 506 aaPredicted RBP16.4■□□□□ 0.22
SPOP-220ENST00000515508 OPN1LWP04000 364 aa16.4■□□□□ 0.22
SPOP-220ENST00000515508 PROCP04070 461 aa16.4■□□□□ 0.22
SPOP-220ENST00000515508 ELK4P28324 431 aa16.4■□□□□ 0.22
SPOP-220ENST00000515508 DNAJB13P59910 316 aa16.4■□□□□ 0.22
SPOP-220ENST00000515508 TNK1Q13470 666 aa16.4■□□□□ 0.22
SPOP-220ENST00000515508 PDE7AQ13946 482 aa16.4■□□□□ 0.22
SPOP-220ENST00000515508 ZNF239Q16600 458 aaKnown RBP16.4■□□□□ 0.22
SPOP-220ENST00000515508 DUSP5Q16690 384 aa16.4■□□□□ 0.22
SPOP-220ENST00000515508 PDSS1Q5T2R2 415 aa16.4■□□□□ 0.22
SPOP-220ENST00000515508 FIGNL1Q6PIW4 674 aa16.4■□□□□ 0.22
SPOP-220ENST00000515508 CXXC5Q7LFL8 322 aaKnown RBP16.4■□□□□ 0.22
SPOP-220ENST00000515508 GABRG1Q8N1C3 465 aa16.4■□□□□ 0.22
SPOP-220ENST00000515508 LRRN4CLQ8ND94 238 aa16.4■□□□□ 0.22
SPOP-220ENST00000515508 STEAP2Q8NFT2 490 aa16.4■□□□□ 0.22
SPOP-220ENST00000515508 SPATA3Q8NHX4 192 aa16.4■□□□□ 0.22
SPOP-220ENST00000515508 FBXO30Q8TB52 745 aa16.4■□□□□ 0.22
SPOP-220ENST00000515508 AKAP1Q92667 903 aaKnown RBP eCLIP16.4■□□□□ 0.22
SPOP-220ENST00000515508 KLHDC3Q9BQ90 382 aa16.4■□□□□ 0.22
SPOP-220ENST00000515508 IQCGQ9H095 443 aaKnown RBP16.4■□□□□ 0.22
SPOP-220ENST00000515508 REEP4Q9H6H4 257 aa16.4■□□□□ 0.22
SPOP-220ENST00000515508 C12orf49Q9H741 205 aa16.4■□□□□ 0.22
SPOP-220ENST00000515508 ACSS1Q9NUB1 689 aaPredicted RBP16.4■□□□□ 0.22
SPOP-220ENST00000515508 C1orf109Q9NX04 203 aa16.4■□□□□ 0.22
SPOP-220ENST00000515508 OVOL3O00110 214 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 LINGO3P0C6S8 592 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 PABPC4LP0CB38 370 aaKnown RBP16.39■□□□□ 0.21
SPOP-220ENST00000515508 SDC1P18827 310 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 PRKAG1P54619 331 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 RPS4XP62701 263 aaKnown RBP16.39■□□□□ 0.21
SPOP-220ENST00000515508 CD226Q15762 336 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 ETFDHQ16134 617 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 GTF2IRD2BQ6EKJ0 949 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 ZCCHC12Q6PEW1 402 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 TFAP2EQ6VUC0 442 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 RNF165Q6ZSG1 346 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 GTF2IRD2Q86UP8 949 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 LILRB1Q8NHL6 650 aaPredicted RBP16.39■□□□□ 0.21
SPOP-220ENST00000515508 RAB3IL1Q8TBN0 382 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 OSTF1Q92882 214 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 S100PBPQ96BU1 408 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 PPCDCQ96CD2 204 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 SH3YL1Q96HL8 342 aaPredicted RBP16.39■□□□□ 0.21
SPOP-220ENST00000515508 TACO1Q9BSH4 297 aaKnown RBP16.39■□□□□ 0.21
SPOP-220ENST00000515508 HDHD5Q9BXW7 423 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 LRTM1Q9HBL6 345 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 FBXO34Q9NWN3 711 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 TBK1Q9UHD2 729 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 LAMP3Q9UQV4 416 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 PTGDR2Q9Y5Y4 395 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 CR1P17927 2039 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 RTTNQ86VV8 2226 aa16.39■□□□□ 0.21
SPOP-220ENST00000515508 FREM1Q5H8C1 2179 aa16.38■□□□□ 0.21
SPOP-220ENST00000515508 SLC28A1O00337 649 aa16.38■□□□□ 0.21
SPOP-220ENST00000515508 SCDO00767 359 aa16.38■□□□□ 0.21
SPOP-220ENST00000515508 HSPA4LO95757 839 aa16.38■□□□□ 0.21
SPOP-220ENST00000515508 HPGDP15428 266 aa16.38■□□□□ 0.21
SPOP-220ENST00000515508 SHC1P29353 583 aa16.38■□□□□ 0.21
SPOP-220ENST00000515508 EIF1P41567 113 aaKnown RBP16.38■□□□□ 0.21
SPOP-220ENST00000515508 SERPINB4P48594 390 aa16.38■□□□□ 0.21
SPOP-220ENST00000515508 PRIM2P49643 509 aa16.38■□□□□ 0.21
SPOP-220ENST00000515508 MANFP55145 182 aaKnown RBP16.38■□□□□ 0.21
SPOP-220ENST00000515508 RNPS1Q15287 305 aaKnown RBP16.38■□□□□ 0.21
SPOP-220ENST00000515508 CCDC153Q494R4 210 aa16.38■□□□□ 0.21
SPOP-220ENST00000515508 CFAP157Q5JU67 520 aa16.38■□□□□ 0.21
SPOP-220ENST00000515508 CLEC6AQ6EIG7 209 aa16.38■□□□□ 0.21
SPOP-220ENST00000515508 Q6ZSR9 355 aa16.38■□□□□ 0.21
SPOP-220ENST00000515508 SZRD1Q7Z422 152 aa16.38■□□□□ 0.21
SPOP-220ENST00000515508 LILRA2Q8N149 483 aa16.38■□□□□ 0.21
SPOP-220ENST00000515508 COX18Q8N8Q8 333 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms