RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 TXNL4AP83876 142 aaKnown RBP10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 MAPK11Q15759 364 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 RIPPLY2Q5TAB7 128 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 SP5Q6BEB4 398 aaPredicted RBP10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 TNFAIP8L2Q6P589 184 aaPredicted RBP10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 POMZP3Q6PJE2 187 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 ARSKQ6UWY0 536 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 OLIG3Q7RTU3 272 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 RNF130Q86XS8 419 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 CCDC71Q8IV32 467 aaPredicted RBP10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 LIX1LQ8IVB5 337 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 TRIML2Q8N7C3 387 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 XAGE5Q8WWM1 108 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 ZNF524Q96C55 264 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 SDCCAG3Q96C92 435 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 ZG16BQ96DA0 208 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 CHMP6Q96FZ7 201 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 SIKE1Q9BRV8 207 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 CALHM2Q9HA72 323 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 POLE3Q9NRF9 147 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 EXD2Q9NVH0 621 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 ALKBH4Q9NXW9 302 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 Q9UFV3 132 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 DKKL1Q9UK85 242 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 ICAM5Q9UMF0 924 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 RPH3AQ9Y2J0 694 aaPredicted RBP10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 ZNF337Q9Y3M9 751 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 DTNAQ9Y4J8 743 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 GMEB1Q9Y692 573 aa10.63□□□□□ -0.71
HMGXB3-203ENST00000510472 UTP20O75691 2785 aaKnown RBP10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 A0A087WZY1 265 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 CENPVL1A0A0U1RR11 272 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 OR2M5A3KFT3 312 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 MBD3L4A6NDZ8 208 aaPredicted RBP10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 MBD3L3A6NE82 208 aaPredicted RBP10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 MBD3L5A6NJ08 208 aaPredicted RBP10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 ETV2O00321 342 aaPredicted RBP10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 KIAA0513O60268 411 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 UGT2B17O75795 530 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 LINGO3P0C6S8 592 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 HTR1EP28566 365 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 CHRNB4P30926 498 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 CHI3L1P36222 383 aaPredicted RBP10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 TFF3Q07654 80 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 MAPK14Q16539 360 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 GTDC1Q4AE62 458 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 FLYWCH1Q4VC44 716 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 TIGD2Q4W5G0 525 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 COX20Q5RI15 118 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 METTL21CQ5VZV1 264 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 TYW3Q6IPR3 259 aaKnown RBP10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 CGB2Q6NT52 195 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 AAGABQ6PD74 315 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 CBLN3Q6UW01 205 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 ENPP6Q6UWR7 440 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 LACC1Q8IV20 430 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 GTPBP8Q8N3Z3 284 aaPredicted RBP10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 ARFGAP2Q8N6H7 521 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 GATSQ8NAP1 163 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 ZNF527Q8NB42 609 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 MBD3L2Q8NHZ7 208 aaPredicted RBP10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 POC1BQ8TC44 478 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 ASB5Q8WWX0 329 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 OIT3Q8WWZ8 545 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 ROPN1LQ96C74 230 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 THOC1Q96FV9 657 aaKnown RBP10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 ITCHQ96J02 903 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 SFXN2Q96NB2 322 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 TRNT1Q96Q11 434 aaKnown RBP10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 NPAS1Q99742 590 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 TUBA1CQ9BQE3 449 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 PIGQQ9BRB3 760 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 PAIP1Q9H074 479 aaKnown RBP10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 RMND5AQ9H871 391 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 MED17Q9NVC6 651 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 COQ3Q9NZJ6 369 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 MKLN1Q9UL63 735 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 PCDHB14Q9Y5E9 798 aa10.62□□□□□ -0.71
HMGXB3-203ENST00000510472 ADGRG4Q8IZF6 3080 aa10.61□□□□□ -0.71
HMGXB3-203ENST00000510472 TRBV5-3A0A0A0MS03 114 aa10.61□□□□□ -0.71
HMGXB3-203ENST00000510472 SERINC4A6NH21 518 aa10.61□□□□□ -0.71
HMGXB3-203ENST00000510472 C19orf84I3L1E1 186 aa10.61□□□□□ -0.71
HMGXB3-203ENST00000510472 HCRTR2O43614 444 aa10.61□□□□□ -0.71
HMGXB3-203ENST00000510472 NTN1O95631 604 aa10.61□□□□□ -0.71
HMGXB3-203ENST00000510472 KRT75O95678 551 aa10.61□□□□□ -0.71
HMGXB3-203ENST00000510472 PEPDP12955 493 aa10.61□□□□□ -0.71
HMGXB3-203ENST00000510472 HPGDP15428 266 aa10.61□□□□□ -0.71
HMGXB3-203ENST00000510472 CAPN3P20807 821 aa10.61□□□□□ -0.71
HMGXB3-203ENST00000510472 GCKP35557 465 aa10.61□□□□□ -0.71
HMGXB3-203ENST00000510472 KHKP50053 298 aa10.61□□□□□ -0.71
HMGXB3-203ENST00000510472 SUCLG1P53597 346 aaKnown RBP10.61□□□□□ -0.71
HMGXB3-203ENST00000510472 STX1BP61266 288 aa10.61□□□□□ -0.71
HMGXB3-203ENST00000510472 ZNF117Q03924 483 aa10.61□□□□□ -0.71
HMGXB3-203ENST00000510472 SQLEQ14534 574 aa10.61□□□□□ -0.71
HMGXB3-203ENST00000510472 SF3B4Q15427 424 aaKnown RBP eCLIP10.61□□□□□ -0.712e-8■■■■■ 30.9
HMGXB3-203ENST00000510472 PLPPR5Q32ZL2 321 aa10.61□□□□□ -0.71
HMGXB3-203ENST00000510472 PAGE3Q5JUK9 113 aa10.61□□□□□ -0.71
HMGXB3-203ENST00000510472 PDZK1Q5T2W1 519 aa10.61□□□□□ -0.71
HMGXB3-203ENST00000510472 LRIF1Q5T3J3 769 aa10.61□□□□□ -0.71
HMGXB3-203ENST00000510472 ATAD3BQ5T9A4 648 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms