RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 KCNAB2Q13303 367 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 RTL8BQ17RB0 113 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 NKPD1Q17RQ9 610 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 C18orf21Q32NC0 220 aaPredicted RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 TOR2AQ5JU69 321 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 SLC27A4Q6P1M0 643 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 FAM151BQ6UXP7 276 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 TRILQ7L0X0 811 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 KMT5CQ86Y97 462 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 STEAP2Q8NFT2 490 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 OR4F15Q8NGB8 312 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 OR2T4Q8NH00 348 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 GRAPLQ8TC17 118 aaPredicted RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 DTD1Q8TEA8 209 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 RAB7BQ96AH8 199 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 DNAJA3Q96EY1 480 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 KIF12Q96FN5 646 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 KAZALD1Q96I82 304 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 OPALINQ96PE5 141 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 CD180Q99467 661 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 STACQ99469 402 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 IER2Q9BTL4 223 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 EFCAB11Q9BUY7 163 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 TSSK6Q9BXA6 273 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 GPR174Q9BXC1 333 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 ALX4Q9H161 411 aaPredicted RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 UCK1Q9HA47 277 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 RHOFQ9HBH0 211 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 AGO4Q9HCK5 861 aaKnown RBP3.39□□□□□ -1.87
USP53-205ENST00000509769 PNPOQ9NVS9 261 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 FBXO34Q9NWN3 711 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 OXSMQ9NWU1 459 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 GPR83Q9NYM4 423 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 PCDHB14Q9Y5E9 798 aa3.39□□□□□ -1.87
USP53-205ENST00000509769 ABHD14A-ACY1A0A1B0GW23 586 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 TSPAN11A1L157 253 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 OR6C68A6NDL8 312 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 MYMKA6NI61 221 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 H0YIV9 168 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 LGALS8O00214 317 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 DPM1O60762 260 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 TBX19O60806 448 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 KCNK5O95279 499 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 IL5P05113 134 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 STSP08842 583 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 AKR1A1P14550 325 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 NDUFS1P28331 727 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 ADORA2BP29275 332 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 CORO1AP31146 461 aaKnown RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 GJA4P35212 333 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 SCNN1AP37088 669 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 SULT1A1P50225 295 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 CLCNKAP51800 687 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 AKR1C2P52895 323 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 PPP4CP60510 307 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 SEC61A1P61619 476 aaKnown RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 NKX3-2P78367 333 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 GHRHRQ02643 423 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 GALNT2Q10471 571 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 CHIT1Q13231 466 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 SP140Q13342 867 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 SEZ6Q53EL9 994 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 CARD17Q5XLA6 110 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 ZPBP2Q6X784 338 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 PIWIL3Q7Z3Z3 882 aaKnown RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 GALNT5Q7Z7M9 940 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 RNF113BQ8IZP6 322 aaKnown RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 TMEM86AQ8N2M4 240 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 GPR26Q8NDV2 337 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 PROKR2Q8NFJ6 384 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 CD99L2Q8TCZ2 262 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 STYXQ8WUJ0 223 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 SENP5Q96HI0 755 aaPredicted RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 CASD1Q96PB1 797 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 UTP23Q9BRU9 249 aaKnown RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 CCM2Q9BSQ5 444 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 BEX2Q9BXY8 128 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 ANGPTL4Q9BY76 406 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 NIFKQ9BYG3 293 aaKnown RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 OR2J1Q9GZK6 312 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 SRRQ9GZT4 340 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 AKIRIN1Q9H9L7 192 aaPredicted RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 ZNF275Q9NSD4 429 aaPredicted RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 KANSL3Q9P2N6 904 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 CPNE7Q9UBL6 633 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 NKX1-2Q9UD57 310 aaPredicted RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 EGFL7Q9UHF1 273 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 MBD1Q9UIS9 605 aaPredicted RBP3.38□□□□□ -1.87
USP53-205ENST00000509769 MED31Q9Y3C7 131 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 PCDHB9Q9Y5E1 797 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 CLCA3PQ9Y6N3 262 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 CEMIPQ8WUJ3 1361 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 ARFGEF2Q9Y6D5 1785 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 DCDC2BA2VCK2 349 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 GABRR3A8MPY1 467 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 SPATA31C2B4DYI2 1134 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 ERVV-1B6SEH8 477 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 MSTNO14793 375 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 ZNF264O43296 627 aa3.38□□□□□ -1.87
USP53-205ENST00000509769 PLRG1O43660 514 aaKnown RBP3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms