RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 SIGLEC12Q96PQ1 595 aa3.9□□□□□ -1.79
VPS52-222ENST00000495981 INTS14Q96SY0 518 aa3.9□□□□□ -1.79
VPS52-222ENST00000495981 DPH7Q9BTV6 452 aa3.9□□□□□ -1.79
VPS52-222ENST00000495981 CARD6Q9BX69 1037 aa3.9□□□□□ -1.79
VPS52-222ENST00000495981 UCK2Q9BZX2 261 aa3.9□□□□□ -1.79
VPS52-222ENST00000495981 VN1R1Q9GZP7 353 aa3.9□□□□□ -1.79
VPS52-222ENST00000495981 DRC3Q9H069 523 aa3.9□□□□□ -1.79
VPS52-222ENST00000495981 KCNN2Q9H2S1 579 aa3.9□□□□□ -1.79
VPS52-222ENST00000495981 MMP27Q9H306 513 aa3.9□□□□□ -1.79
VPS52-222ENST00000495981 PIGMQ9H3S5 423 aa3.9□□□□□ -1.79
VPS52-222ENST00000495981 ESRP2Q9H6T0 727 aaKnown RBP3.9□□□□□ -1.79
VPS52-222ENST00000495981 ANKZF1Q9H8Y5 726 aa3.9□□□□□ -1.79
VPS52-222ENST00000495981 MKKSQ9NPJ1 570 aaPredicted RBP3.9□□□□□ -1.79
VPS52-222ENST00000495981 TRMT1Q9NXH9 659 aaKnown RBP3.9□□□□□ -1.79
VPS52-222ENST00000495981 TRPC4Q9UBN4 977 aa3.9□□□□□ -1.79
VPS52-222ENST00000495981 SEC14L3Q9UDX4 400 aa3.9□□□□□ -1.79
VPS52-222ENST00000495981 TAC3Q9UHF0 121 aa3.9□□□□□ -1.79
VPS52-222ENST00000495981 GNPTGQ9UJJ9 305 aa3.9□□□□□ -1.79
VPS52-222ENST00000495981 PACSIN2Q9UNF0 486 aaPredicted RBP3.9□□□□□ -1.79
VPS52-222ENST00000495981 LIPT1Q9Y234 373 aa3.9□□□□□ -1.79
VPS52-222ENST00000495981 KCNK7Q9Y2U2 307 aa3.9□□□□□ -1.79
VPS52-222ENST00000495981 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.9□□□□□ -1.79
VPS52-222ENST00000495981 WNK1Q9H4A3 2382 aa3.9□□□□□ -1.79
VPS52-222ENST00000495981 SCN2AQ99250 2005 aa3.9□□□□□ -1.79
VPS52-222ENST00000495981 INTS1Q8N201 2190 aaKnown RBP3.89□□□□□ -1.79
VPS52-222ENST00000495981 A0A0A6YYC8 382 aaPredicted RBP3.89□□□□□ -1.79
VPS52-222ENST00000495981 IGHV3-20A0A0C4DH32 117 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 I3L1I5 382 aaPredicted RBP3.89□□□□□ -1.79
VPS52-222ENST00000495981 HSPB6O14558 160 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 VCYO14598 125 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 PRPF4O43172 522 aaKnown RBP eCLIP3.89□□□□□ -1.79
VPS52-222ENST00000495981 SRPX2O60687 465 aaPredicted RBP3.89□□□□□ -1.79
VPS52-222ENST00000495981 RSL1D1O76021 490 aaKnown RBP3.89□□□□□ -1.79
VPS52-222ENST00000495981 SLC16A8O95907 504 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 STATHP02808 62 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 LCKP06239 509 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 SNRNP70P08621 437 aaKnown RBP3.89□□□□□ -1.79
VPS52-222ENST00000495981 ZSCAN5DPP0CG00 497 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 C8orf89P0DMQ9 161 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 ERVK-10P10266 1014 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 TFEBP19484 476 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 ACHEP22303 614 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 NMBRP28336 390 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 TACR3P29371 465 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 ATP6V1E1P36543 226 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 TTPAP49638 278 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 TBPL1P62380 186 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 HSF1Q00613 529 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 RELAQ04206 551 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 FOLH1Q04609 750 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 ZNF33BQ06732 778 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 ACTN3Q08043 901 aaPredicted RBP3.89□□□□□ -1.79
VPS52-222ENST00000495981 TUBA3CQ13748 450 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 SNAPC1Q16533 368 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 KCTD19Q17RG1 926 aaPredicted RBP3.89□□□□□ -1.79
VPS52-222ENST00000495981 KRTAP19-4Q3LI73 84 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 ACSBG2Q5FVE4 666 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 ENTPD8Q5MY95 495 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 ARMC4Q5T2S8 1044 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 FCRLBQ6BAA4 426 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 TUBA3EQ6PEY2 450 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 TMEM207Q6UWW9 146 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 LRIG3Q6UXM1 1119 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 PPP1R21Q6ZMI0 780 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 C3P1Q6ZMU1 363 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 RAPH1Q70E73 1250 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 LINGO2Q7L985 606 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 NUP54Q7Z3B4 507 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 SPATA19Q7Z5L4 167 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 CENPVQ7Z7K6 275 aaPredicted RBP3.89□□□□□ -1.79
VPS52-222ENST00000495981 LRRC6Q86X45 466 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 CRLF3Q8IUI8 442 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 DENND6AQ8IWF6 608 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 ZDHHC23Q8IYP9 409 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 ZNF619Q8N2I2 560 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 TMCO5AQ8N6Q1 288 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 SPC24Q8NBT2 197 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 PPFIBP2Q8ND30 876 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 OR9A4Q8NGU2 314 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 OR4L1Q8NH43 312 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 PHF10Q8WUB8 498 aaKnown RBP3.89□□□□□ -1.79
VPS52-222ENST00000495981 RAD51AP1Q96B01 352 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 HES6Q96HZ4 224 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 MAGED4Q96JG8 741 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 C8orf49Q96NF6 230 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 FERMT1Q9BQL6 677 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 ACAT2Q9BWD1 397 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 TSSK1BQ9BXA7 367 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 RTN4RQ9BZR6 473 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 MMADHCQ9H3L0 296 aaPredicted RBP3.89□□□□□ -1.79
VPS52-222ENST00000495981 ZCCHC4Q9H5U6 513 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 CNOT10Q9H9A5 744 aaKnown RBP3.89□□□□□ -1.79
VPS52-222ENST00000495981 PFDN4Q9NQP4 134 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 ANKRD10Q9NXR5 420 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 GALPQ9UBC7 116 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 PCYOX1Q9UHG3 505 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 TTC7AQ9ULT0 858 aaPredicted RBP3.89□□□□□ -1.79
VPS52-222ENST00000495981 MEMO1Q9Y316 297 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 GTF3C1Q12789 2109 aa3.89□□□□□ -1.79
VPS52-222ENST00000495981 TENM1Q9UKZ4 2725 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms