RNA–Protein interactions for RNA: ENST00000488958.5

PHF11-215, Transcript of PHD finger protein 11, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHF11, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF11-215ENST00000488958 TNFRSF19Q9NS68 423 aa4.41□□□□□ -1.7
PHF11-215ENST00000488958 TP53TG3Q9ULZ0 132 aa4.41□□□□□ -1.7
PHF11-215ENST00000488958 PTCH1Q13635 1447 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 ATP10DQ9P241 1426 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 A0A1B0GVY2 172 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 CTAGE5O15320 804 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 OR1F1O43749 312 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 RAMP1O60894 148 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 GIG44P09565 113 aaPredicted RBP4.4□□□□□ -1.71
PHF11-215ENST00000488958 HNF1AP20823 631 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 ERVPABLB-1P60509 514 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 NUCB2P80303 420 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 PLOD1Q02809 727 aaPredicted RBP4.4□□□□□ -1.71
PHF11-215ENST00000488958 CD47Q08722 323 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 CCDC57Q2TAC2 916 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 QRICH1Q2TAL8 776 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 KRT71Q3SY84 523 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 TMEM52BQ4KMG9 183 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 SLC22A10Q63ZE4 541 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 ZNF57Q68EA5 555 aaPredicted RBP4.4□□□□□ -1.71
PHF11-215ENST00000488958 CENPUQ71F23 418 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 EIF1ADQ8N9N8 165 aaKnown RBP4.4□□□□□ -1.71
PHF11-215ENST00000488958 OR5AU1Q8NGC0 362 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 NANPQ8TBE9 248 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 UPRTQ96BW1 309 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 SECISBP2Q96T21 854 aaKnown RBP4.4□□□□□ -1.71
PHF11-215ENST00000488958 NFKBIZQ9BYH8 718 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 DEFB126Q9BYW3 111 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 RHOJQ9H4E5 214 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 MIEF1Q9NQG6 463 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 PRR34Q9NV39 138 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 DPM3Q9P2X0 92 aa4.4□□□□□ -1.71
PHF11-215ENST00000488958 EIF3LQ9Y262 564 aaKnown RBP4.4□□□□□ -1.71
PHF11-215ENST00000488958 MRPS7Q9Y2R9 242 aaKnown RBP4.4□□□□□ -1.71
PHF11-215ENST00000488958 CCDC7Q96M83 1385 aa4.39□□□□□ -1.71
PHF11-215ENST00000488958 PPIAL4DF5H284 164 aa4.39□□□□□ -1.71
PHF11-215ENST00000488958 UBXN8O00124 270 aa4.39□□□□□ -1.71
PHF11-215ENST00000488958 JAK2O60674 1132 aa4.39□□□□□ -1.71
PHF11-215ENST00000488958 SURF6O75683 361 aaKnown RBP4.39□□□□□ -1.71
PHF11-215ENST00000488958 KIAA0754O94854 1291 aa4.39□□□□□ -1.71
PHF11-215ENST00000488958 CSF2P04141 144 aa4.39□□□□□ -1.71
PHF11-215ENST00000488958 UGT2B4P06133 528 aa4.39□□□□□ -1.71
PHF11-215ENST00000488958 KLK2P20151 261 aa4.39□□□□□ -1.71
PHF11-215ENST00000488958 NT5EP21589 574 aa4.39□□□□□ -1.71
PHF11-215ENST00000488958 UQCRC2P22695 453 aa4.39□□□□□ -1.71
PHF11-215ENST00000488958 PTBP1P26599 531 aaKnown RBP eCLIP4.39□□□□□ -1.71
PHF11-215ENST00000488958 CDH5P33151 784 aaPredicted RBP4.39□□□□□ -1.71
PHF11-215ENST00000488958 MEOX2P50222 304 aa4.39□□□□□ -1.71
PHF11-215ENST00000488958 NAPAP54920 295 aa4.39□□□□□ -1.71
PHF11-215ENST00000488958 OSTNP61366 133 aa4.39□□□□□ -1.71
PHF11-215ENST00000488958 CYP51A1Q16850 503 aa4.39□□□□□ -1.71
PHF11-215ENST00000488958 OLFML2AQ68BL7 652 aa4.39□□□□□ -1.71
PHF11-215ENST00000488958 PAXXQ9BUH6 204 aa4.39□□□□□ -1.71
PHF11-215ENST00000488958 COMMD4Q9H0A8 199 aa4.39□□□□□ -1.71
PHF11-215ENST00000488958 IKZF5Q9H5V7 419 aa4.39□□□□□ -1.71
PHF11-215ENST00000488958 ZNF275Q9NSD4 429 aaPredicted RBP4.39□□□□□ -1.71
PHF11-215ENST00000488958 UTP6Q9NYH9 597 aaKnown RBP4.39□□□□□ -1.71
PHF11-215ENST00000488958 MRPS33Q9Y291 106 aaKnown RBP4.39□□□□□ -1.71
PHF11-215ENST00000488958 AP4B1Q9Y6B7 739 aa4.39□□□□□ -1.71
PHF11-215ENST00000488958 CARMIL1Q5VZK9 1371 aa4.38□□□□□ -1.71
PHF11-215ENST00000488958 ZNF318Q5VUA4 2279 aa4.38□□□□□ -1.71
PHF11-215ENST00000488958 C15orf38-AP3S2A0A0A6YYH1 394 aa4.38□□□□□ -1.71
PHF11-215ENST00000488958 ZSCAN5BA6NJL1 495 aa4.38□□□□□ -1.71
PHF11-215ENST00000488958 A8MUI8 341 aa4.38□□□□□ -1.71
PHF11-215ENST00000488958 FAM220BPB1ANY3 271 aa4.38□□□□□ -1.71
PHF11-215ENST00000488958 SNNO75324 88 aaPredicted RBP4.38□□□□□ -1.71
PHF11-215ENST00000488958 CHI3L1P36222 383 aaPredicted RBP4.38□□□□□ -1.71
PHF11-215ENST00000488958 PJVKQ0ZLH3 352 aa4.38□□□□□ -1.71
PHF11-215ENST00000488958 TMEM184AQ6ZMB5 413 aa4.38□□□□□ -1.71
PHF11-215ENST00000488958 ZNF584Q8IVC4 421 aa4.38□□□□□ -1.71
PHF11-215ENST00000488958 BPIFB2Q8N4F0 458 aa4.38□□□□□ -1.71
PHF11-215ENST00000488958 ZNF525Q8N782 197 aa4.38□□□□□ -1.71
PHF11-215ENST00000488958 PNPT1Q8TCS8 783 aaKnown RBP4.38□□□□□ -1.71
PHF11-215ENST00000488958 ADAMTS16Q8TE57 1224 aa4.38□□□□□ -1.71
PHF11-215ENST00000488958 RPL3LQ92901 407 aaKnown RBP4.38□□□□□ -1.71
PHF11-215ENST00000488958 DHTKD1Q96HY7 919 aaPredicted RBP4.38□□□□□ -1.71
PHF11-215ENST00000488958 SLC25A51Q9H1U9 297 aa4.38□□□□□ -1.71
PHF11-215ENST00000488958 DHX33Q9H6R0 707 aaKnown RBP4.38□□□□□ -1.71
PHF11-215ENST00000488958 POLD4Q9HCU8 107 aa4.38□□□□□ -1.71
PHF11-215ENST00000488958 COX16Q9P0S2 106 aa4.38□□□□□ -1.71
PHF11-215ENST00000488958 GSAPA4D1B5 854 aa4.37□□□□□ -1.71
PHF11-215ENST00000488958 MBLAC1A4D2B0 266 aaPredicted RBP4.37□□□□□ -1.71
PHF11-215ENST00000488958 AP3B1O00203 1094 aa4.37□□□□□ -1.71
PHF11-215ENST00000488958 ZSCAN12O43309 604 aa4.37□□□□□ -1.71
PHF11-215ENST00000488958 NUDT21O43809 227 aaKnown RBP4.37□□□□□ -1.71
PHF11-215ENST00000488958 BCAS1O75363 584 aaPredicted RBP4.37□□□□□ -1.71
PHF11-215ENST00000488958 ANXA3P12429 323 aa4.37□□□□□ -1.71
PHF11-215ENST00000488958 H2AFXP16104 143 aaPredicted RBP4.37□□□□□ -1.71
PHF11-215ENST00000488958 IGHV1-2P23083 117 aa4.37□□□□□ -1.71
PHF11-215ENST00000488958 CBX1P83916 185 aa4.37□□□□□ -1.71
PHF11-215ENST00000488958 GLYR1Q49A26 553 aaPredicted RBP4.37□□□□□ -1.71
PHF11-215ENST00000488958 LRRC23Q53EV4 343 aaPredicted RBP4.37□□□□□ -1.71
PHF11-215ENST00000488958 BOLA3Q53S33 107 aa4.37□□□□□ -1.71
PHF11-215ENST00000488958 STAC2Q6ZMT1 411 aa4.37□□□□□ -1.71
PHF11-215ENST00000488958 CYS1Q717R9 158 aa4.37□□□□□ -1.71
PHF11-215ENST00000488958 CSNK1A1LQ8N752 337 aa4.37□□□□□ -1.71
PHF11-215ENST00000488958 RAET1EQ8TD07 263 aa4.37□□□□□ -1.71
PHF11-215ENST00000488958 RNF139Q8WU17 664 aa4.37□□□□□ -1.71
PHF11-215ENST00000488958 SENP8Q96LD8 212 aa4.37□□□□□ -1.71
PHF11-215ENST00000488958 TSSK1BQ9BXA7 367 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms