RNA–Protein interactions for RNA: ENST00000483882.1

NR1H3-222, Transcript of nuclear receptor subfamily 1 group H member 3, human

TSL 2

Gene NR1H3, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NR1H3-222	ENST00000483882	ARHGAP11A	Q6P4F7	1023 aa		13.59	□□□□□ -0.23
NR1H3-222	ENST00000483882	CDH24	Q86UP0	819 aa		13.59	□□□□□ -0.23
NR1H3-222	ENST00000483882	MARVELD2	Q8N4S9	558 aa		13.59	□□□□□ -0.23
NR1H3-222	ENST00000483882	OR2M7	Q8NG81	312 aa		13.59	□□□□□ -0.23
NR1H3-222	ENST00000483882	ASB5	Q8WWX0	329 aa		13.59	□□□□□ -0.23
NR1H3-222	ENST00000483882	ZG16B	Q96DA0	208 aa		13.59	□□□□□ -0.23
NR1H3-222	ENST00000483882	GPATCH1	Q9BRR8	931 aa	Known RBP	13.59	□□□□□ -0.23
NR1H3-222	ENST00000483882	ZNF350	Q9GZX5	532 aa		13.59	□□□□□ -0.23
NR1H3-222	ENST00000483882	TP63	Q9H3D4	680 aa	Predicted RBP	13.59	□□□□□ -0.23
NR1H3-222	ENST00000483882	NANOG	Q9H9S0	305 aa		13.59	□□□□□ -0.23
NR1H3-222	ENST00000483882	TUBA8	Q9NY65	449 aa	Predicted RBP	13.59	□□□□□ -0.23
NR1H3-222	ENST00000483882	CNIH4	Q9P003	139 aa		13.59	□□□□□ -0.23
NR1H3-222	ENST00000483882	PRAMEF25	A6NGN4	478 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	LRRC3C	A6NJW4	275 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	ACOT7	O00154	380 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	TRIM3	O75382	744 aa	Predicted RBP	13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	OXSR1	O95747	527 aa	Predicted RBP	13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	NPPA	P01160	153 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882		P04436	131 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	TFPT	P0C1Z6	253 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	T-ENOL	P0DO92	83 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	KRT20	P35900	424 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	DSTN	P60981	165 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	PPIA	P62937	165 aa	Known RBP	13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	FADD	Q13158	208 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	KRT72	Q14CN4	511 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	TYW3	Q6IPR3	259 aa	Known RBP	13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	FRRS1	Q6ZNA5	592 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	FBXO27	Q8NI29	283 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	SLC38A5	Q8WUX1	472 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	RND1	Q92730	232 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	MAL2	Q969L2	176 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	ROPN1L	Q96C74	230 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	SAP130	Q9H0E3	1048 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	SLC38A1	Q9H2H9	487 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	KAT8	Q9H7Z6	458 aa	Known RBP	13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	MCCC2	Q9HCC0	563 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	GMPR2	Q9P2T1	348 aa	Known RBP	13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	MRTO4	Q9UKD2	239 aa	Known RBP	13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	MKLN1	Q9UL63	735 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	RNF6	Q9Y252	685 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	PDZD2	O15018	2839 aa		13.58	□□□□□ -0.24
NR1H3-222	ENST00000483882	OTOG	Q6ZRI0	2925 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	GTF3C1	Q12789	2109 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	TEP1	Q99973	2627 aa	Known RBP	13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	NKX2-6	A6NCS4	301 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	NPIPA2	E9PIF3	369 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	NPIPA3	F8WFD2	350 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	GLS	O94925	669 aa	Predicted RBP	13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	H6PD	O95479	791 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	AK1	P00568	194 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	NGFR	P08138	427 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	GUSB	P08236	651 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	TBXA2R	P21731	343 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	PPIB	P23284	216 aa	Known RBP	13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	SLC6A2	P23975	617 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	CHRNB4	P30926	498 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	EVI2B	P34910	448 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	RIPPLY3	P57055	190 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	TXNL4A	P83876	142 aa	Known RBP	13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	CHRNE	Q04844	493 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	BNIP1	Q12981	228 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	MAPK14	Q16539	360 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	HACD2	Q6Y1H2	254 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	C16orf62	Q7Z3J2	963 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	HMGN2P46	Q86SG4	172 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	MARCH3	Q86UD3	253 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	PTOV1	Q86YD1	416 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	CCDC71	Q8IV32	467 aa	Predicted RBP	13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	RPRML	Q8N4K4	120 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	PCYOX1L	Q8NBM8	494 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	TMCO6	Q96DC7	493 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	CMTM5	Q96DZ9	223 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	TRNT1	Q96Q11	434 aa	Known RBP	13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	KLHDC3	Q9BQ90	382 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	FAM173A	Q9BQD7	235 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	G6PC3	Q9BUM1	346 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	UCK2	Q9BZX2	261 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	METTL7A	Q9H8H3	244 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	EFCAB1	Q9HAE3	211 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	A4GALT	Q9NPC4	353 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	PLSCR2	Q9NRY7	297 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	EXD2	Q9NVH0	621 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	CMTM6	Q9NX76	183 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	USP22	Q9UPT9	525 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	PCDHGB3	Q9Y5G1	929 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	CACNA1C	Q13936	2221 aa		13.57	□□□□□ -0.24
NR1H3-222	ENST00000483882	ANKRD65	E5RJM6	399 aa		13.56	□□□□□ -0.24
NR1H3-222	ENST00000483882	SCO2	O43819	266 aa		13.56	□□□□□ -0.24
NR1H3-222	ENST00000483882	STX11	O75558	287 aa		13.56	□□□□□ -0.24
NR1H3-222	ENST00000483882	DNAJC8	O75937	253 aa	Predicted RBP	13.56	□□□□□ -0.24
NR1H3-222	ENST00000483882	AGR2	O95994	175 aa		13.56	□□□□□ -0.24
NR1H3-222	ENST00000483882	RFPL3S	P0C7P2	107 aa		13.56	□□□□□ -0.24
NR1H3-222	ENST00000483882	ARAF	P10398	606 aa		13.56	□□□□□ -0.24
NR1H3-222	ENST00000483882	LCN1	P31025	176 aa		13.56	□□□□□ -0.24
NR1H3-222	ENST00000483882	RNF144A	P50876	292 aa	Predicted RBP	13.56	□□□□□ -0.24
NR1H3-222	ENST00000483882	PSMD4	P55036	377 aa	Known RBP	13.56	□□□□□ -0.24
NR1H3-222	ENST00000483882	NUP107	P57740	925 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms