RNA–Protein interactions for RNA: ENST00000481040.1

COPA-203, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 3

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-203ENST00000481040 HAS3O00219 553 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 PES1O00541 588 aaKnown RBP4.44□□□□□ -1.7
COPA-203ENST00000481040 ZNF749O43361 778 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 RAMP1O60894 148 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 FRAT2O75474 233 aaPredicted RBP4.44□□□□□ -1.7
COPA-203ENST00000481040 SLITRK3O94933 977 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 CLDN9O95484 217 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 ATP1B2P14415 290 aaPredicted RBP4.44□□□□□ -1.7
COPA-203ENST00000481040 IMPDH1P20839 514 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 PDHA2P29803 388 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 RPL13AP40429 203 aaKnown RBP4.44□□□□□ -1.7
COPA-203ENST00000481040 DUSP3P51452 185 aaPredicted RBP4.44□□□□□ -1.7
COPA-203ENST00000481040 LINC01547P58512 204 aaPredicted RBP4.44□□□□□ -1.7
COPA-203ENST00000481040 MRPS21P82921 87 aaKnown RBP4.44□□□□□ -1.7
COPA-203ENST00000481040 ZNF177Q13360 481 aaPredicted RBP4.44□□□□□ -1.7
COPA-203ENST00000481040 GK3PQ14409 553 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 WDR43Q15061 677 aaKnown RBP eCLIP4.44□□□□□ -1.7
COPA-203ENST00000481040 RBBP5Q15291 538 aaKnown RBP4.44□□□□□ -1.7
COPA-203ENST00000481040 UPP1Q16831 310 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 SLC25A52Q3SY17 297 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 STAC2Q6ZMT1 411 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 FRRS1Q6ZNA5 592 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 Q6ZRP5 223 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 Q6ZSR9 355 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 CENPQQ7L2Z9 268 aaPredicted RBP4.44□□□□□ -1.7
COPA-203ENST00000481040 LUZP2Q86TE4 346 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 CCDC71Q8IV32 467 aaPredicted RBP4.44□□□□□ -1.7
COPA-203ENST00000481040 FGFRL1Q8N441 504 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 PDCL2Q8N4E4 241 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 COMMD1Q8N668 190 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 OR2L3Q8NG85 312 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 HAVCR1Q96D42 359 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 RAB3CQ96E17 227 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 CENPKQ9BS16 269 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 TRIM62Q9BVG3 475 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 IQCGQ9H095 443 aaKnown RBP4.44□□□□□ -1.7
COPA-203ENST00000481040 LIME1Q9H400 295 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 RNF41Q9H4P4 317 aaPredicted RBP4.44□□□□□ -1.7
COPA-203ENST00000481040 AUNIPQ9H7T9 357 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 ANKRA2Q9H9E1 313 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 ELL3Q9HB65 397 aaPredicted RBP4.44□□□□□ -1.7
COPA-203ENST00000481040 ZNF160Q9HCG1 818 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 DEPPQ9NTK1 212 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 GCNT4Q9P109 453 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 RCOR3Q9P2K3 495 aaPredicted RBP4.44□□□□□ -1.7
COPA-203ENST00000481040 SLC7A8Q9UHI5 535 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 ABCG2Q9UNQ0 655 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 OARD1Q9Y530 152 aa4.44□□□□□ -1.7
COPA-203ENST00000481040 TNIKQ9UKE5 1360 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 A0A1W2PPE3 182 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 ACOD1A6NK06 481 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 C9JVG2 144 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 BLOC1S5-TXNDC5H3BN57 136 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 POLR2DO15514 142 aaKnown RBP4.43□□□□□ -1.7
COPA-203ENST00000481040 PRKAB2O43741 272 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 TYROBPO43914 113 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 PCDH7O60245 1069 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 CLDN1O95832 211 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 NUDT14O95848 222 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 IGHG3P01860 377 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 FCGR3AP08637 254 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 MCF2P10911 925 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 PTBP1P26599 531 aaKnown RBP eCLIP4.43□□□□□ -1.7
COPA-203ENST00000481040 HNRNPH3P31942 346 aaKnown RBP4.43□□□□□ -1.7
COPA-203ENST00000481040 MMP12P39900 470 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 CDH6P55285 790 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 C21orf59P57076 290 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 RIPPLY1Q0D2K3 151 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 RAB40BQ12829 278 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 MICBQ29980 383 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 HLA-BQ31612 363 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 ALKBH6Q3KRA9 238 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 DCST2Q5T1A1 773 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 OTUD3Q5T2D3 398 aaPredicted RBP4.43□□□□□ -1.7
COPA-203ENST00000481040 SEL1L2Q5TEA6 688 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 WSCD1Q658N2 575 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 ZNF324BQ6AW86 544 aaPredicted RBP4.43□□□□□ -1.7
COPA-203ENST00000481040 PAQR6Q6TCH4 344 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 LCLAT1Q6UWP7 414 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 NUFIP2Q7Z417 695 aaKnown RBP4.43□□□□□ -1.7
COPA-203ENST00000481040 CEACAM19Q7Z692 300 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 TRIM69Q86WT6 500 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 APLFQ8IW19 511 aaPredicted RBP4.43□□□□□ -1.7
COPA-203ENST00000481040 KATNAL2Q8IYT4 538 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 BPIFB2Q8N4F0 458 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 SDR9C7Q8NEX9 313 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 OR1B1Q8NGR6 318 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 TM4SF19Q96DZ7 209 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 NSMCE3Q96MG7 304 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 TSNARE1Q96NA8 513 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 GSDMAQ96QA5 445 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 CCT8L2Q96SF2 557 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 MEIS3Q99687 375 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 CLEC7AQ9BXN2 247 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 DGCR6LQ9BY27 220 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 NARFLQ9H6Q4 476 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 GEMIN7Q9H840 131 aaKnown RBP4.43□□□□□ -1.7
COPA-203ENST00000481040 VCPKMTQ9H867 229 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 SPHK2Q9NRA0 654 aa4.43□□□□□ -1.7
COPA-203ENST00000481040 PRPF19Q9UMS4 504 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 219.8 ms