RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 OR5M3Q8NGP4 307 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 LZICQ8WZA0 190 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 TMEM41AQ96HV5 264 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 SIGLEC12Q96PQ1 595 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 RSPO3Q9BXY4 272 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 TBL1XR1Q9BZK7 514 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 ARMC7Q9H6L4 198 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 METTL7AQ9H8H3 244 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 PROK2Q9HC23 129 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 EXOSC3Q9NQT5 275 aaKnown RBP11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 ADPRHL2Q9NX46 363 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 ANKRD10Q9NXR5 420 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 KLRF1Q9NZS2 232 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 PRDM4Q9UKN5 801 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 BAG5Q9UL15 447 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 ZNF232Q9UNY5 417 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 KLF13Q9Y2Y9 288 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 CHST2Q9Y4C5 530 aa11.48□□□□□ -0.57
TRAPPC12-218ENST00000479897 HEATR5AQ86XA9 2040 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 TRAV17A0A0B4J275 112 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 TCRBV3S1A0A5B6 114 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 SUV39H1O43463 412 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 NDUFB5O43674 189 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 EIF4E2O60573 245 aaKnown RBP11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 SNX4O95219 450 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 ANGPTL1O95841 491 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 EPPINO95925 133 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 LGI1O95970 557 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 P04436 131 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 FESP07332 822 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 UBL4AP11441 157 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 HOXB6P17509 224 aaKnown RBP11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 KCNAB2Q13303 367 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 SKP2Q13309 424 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 NRF1Q16656 503 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 DUSP7Q16829 419 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 C1orf146Q5VVC0 180 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 ZNF771Q7L3S4 317 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 ZADH2Q8N4Q0 377 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 TMEM178AQ8NBL3 297 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 GPR32P1Q8NGA4 272 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 SLC26A7Q8TE54 656 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 ABHD17AQ96GS6 310 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 CRELD1Q96HD1 420 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 CNTNAP3BQ96NU0 1288 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 DOHHQ9BU89 302 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 CNTNAP3Q9BZ76 1288 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 RTN4RQ9BZR6 473 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 SDHAF3Q9NRP4 125 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 DNAJB12Q9NXW2 375 aaKnown RBP11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 PLA2G3Q9NZ20 509 aa11.47□□□□□ -0.57
TRAPPC12-218ENST00000479897 ZZEF1O43149 2961 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 SNPHO15079 494 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 ZNF264O43296 627 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 SCO2O43819 266 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 TPST1O60507 370 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 DPM1O60762 260 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 TRIM3O75382 744 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 CSTAP01040 98 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 PDGFAP04085 211 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 SEMG1P04279 462 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 SP1P08047 785 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 UMPSP11172 480 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 CD46P15529 392 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 SUMO3P55854 103 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 ACTR3P61158 418 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 C17orf67Q0P5P2 114 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 PRAMEF20Q5VT98 475 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 BICRALQ6AI39 1079 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 SPINK14Q6IE38 97 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 SLC25A25Q6KCM7 469 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 CYP2R1Q6VVX0 501 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 Q6ZS92 163 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 MARCH3Q86UD3 253 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 COMTD1Q86VU5 262 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 SPPL2CQ8IUH8 684 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 ZNF440Q8IYI8 595 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 ZNF614Q8N883 585 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 SMYD1Q8NB12 490 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 C9orf43Q8TAL5 461 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 PROX1Q92786 737 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 HSH2DQ96JZ2 352 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 LRGUKQ96M69 825 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 C5orf34Q96MH7 638 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 ARHGDIGQ99819 225 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 LAT2Q9GZY6 243 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 MAGIXQ9H6Y5 334 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 GALNT9Q9HCQ5 603 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 DEPPQ9NTK1 212 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 KLHL28Q9NXS3 571 aa11.46□□□□□ -0.57
TRAPPC12-218ENST00000479897 CLDN24A6NM45 220 aa11.45□□□□□ -0.58
TRAPPC12-218ENST00000479897 FAAHO00519 579 aa11.45□□□□□ -0.58
TRAPPC12-218ENST00000479897 F10P00742 488 aa11.45□□□□□ -0.58
TRAPPC12-218ENST00000479897 GPIP06744 558 aa11.45□□□□□ -0.58
TRAPPC12-218ENST00000479897 CNR1P21554 472 aa11.45□□□□□ -0.58
TRAPPC12-218ENST00000479897 ELAVL4P26378 380 aaKnown RBP11.45□□□□□ -0.58
TRAPPC12-218ENST00000479897 MSX1P28360 303 aa11.45□□□□□ -0.58
TRAPPC12-218ENST00000479897 CD97P48960 835 aa11.45□□□□□ -0.58
TRAPPC12-218ENST00000479897 ST13P50502 369 aaKnown RBP11.45□□□□□ -0.58
TRAPPC12-218ENST00000479897 KCNC4Q03721 635 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms