RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 RIMS3Q9UJD0 308 aa13.01□□□□□ -0.33
RPP40-205ENST00000479782 FAM32AQ9Y421 112 aaKnown RBP13.01□□□□□ -0.33
RPP40-205ENST00000479782 M0R3H8 397 aa13□□□□□ -0.33
RPP40-205ENST00000479782 GNGT2O14610 69 aa13□□□□□ -0.33
RPP40-205ENST00000479782 ADAMDEC1O15204 470 aa13□□□□□ -0.33
RPP40-205ENST00000479782 EFSO43281 561 aa13□□□□□ -0.33
RPP40-205ENST00000479782 NDUFB5O43674 189 aa13□□□□□ -0.33
RPP40-205ENST00000479782 FMO6PO60774 539 aa13□□□□□ -0.33
RPP40-205ENST00000479782 OR6B1O95007 311 aa13□□□□□ -0.33
RPP40-205ENST00000479782 PRSS23O95084 383 aa13□□□□□ -0.33
RPP40-205ENST00000479782 UBL4AP11441 157 aa13□□□□□ -0.33
RPP40-205ENST00000479782 EIF2S3P41091 472 aaKnown RBP13□□□□□ -0.33
RPP40-205ENST00000479782 SNTA1Q13424 505 aa13□□□□□ -0.33
RPP40-205ENST00000479782 GK3PQ14409 553 aa13□□□□□ -0.33
RPP40-205ENST00000479782 SNCBQ16143 134 aa13□□□□□ -0.33
RPP40-205ENST00000479782 B3GNTL1Q67FW5 361 aaPredicted RBP13□□□□□ -0.33
RPP40-205ENST00000479782 DESI1Q6ICB0 168 aa13□□□□□ -0.33
RPP40-205ENST00000479782 OR2T5Q6IEZ7 315 aa13□□□□□ -0.33
RPP40-205ENST00000479782 HMBOX1Q6NT76 420 aa13□□□□□ -0.33
RPP40-205ENST00000479782 IL20RBQ6UXL0 311 aa13□□□□□ -0.33
RPP40-205ENST00000479782 ZNF550Q7Z398 422 aa13□□□□□ -0.33
RPP40-205ENST00000479782 TSEN54Q7Z6J9 526 aaKnown RBP13□□□□□ -0.33
RPP40-205ENST00000479782 LACC1Q8IV20 430 aa13□□□□□ -0.33
RPP40-205ENST00000479782 OR4D11Q8NGI4 311 aa13□□□□□ -0.33
RPP40-205ENST00000479782 OR6T1Q8NGN1 323 aa13□□□□□ -0.33
RPP40-205ENST00000479782 OR5M3Q8NGP4 307 aa13□□□□□ -0.33
RPP40-205ENST00000479782 OR2T29Q8NH02 315 aa13□□□□□ -0.33
RPP40-205ENST00000479782 PHOSPHO1Q8TCT1 267 aa13□□□□□ -0.33
RPP40-205ENST00000479782 GRHL3Q8TE85 626 aa13□□□□□ -0.33
RPP40-205ENST00000479782 GATA6Q92908 595 aa13□□□□□ -0.33
RPP40-205ENST00000479782 SGCZQ96LD1 299 aa13□□□□□ -0.33
RPP40-205ENST00000479782 NODALQ96S42 347 aa13□□□□□ -0.33
RPP40-205ENST00000479782 PIP5K1AQ99755 562 aa13□□□□□ -0.33
RPP40-205ENST00000479782 ING2Q9H160 280 aa13□□□□□ -0.33
RPP40-205ENST00000479782 STOML1Q9UBI4 398 aa13□□□□□ -0.33
RPP40-205ENST00000479782 TESQ9UGI8 421 aaKnown RBP13□□□□□ -0.33
RPP40-205ENST00000479782 PRDM4Q9UKN5 801 aa13□□□□□ -0.33
RPP40-205ENST00000479782 ACAD8Q9UKU7 415 aa13□□□□□ -0.33
RPP40-205ENST00000479782 CHCHD2Q9Y6H1 151 aaPredicted RBP13□□□□□ -0.33
RPP40-205ENST00000479782 AHCTF1Q8WYP5 2266 aa13□□□□□ -0.33
RPP40-205ENST00000479782 CPAMD8Q8IZJ3 1885 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 CFAP54Q96N23 3096 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 GTPBP1O00178 669 aaKnown RBP12.99□□□□□ -0.33
RPP40-205ENST00000479782 AP3D1O14617 1153 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 CASQ2O14958 399 aaPredicted RBP12.99□□□□□ -0.33
RPP40-205ENST00000479782 RRP8O43159 456 aaKnown RBP12.99□□□□□ -0.33
RPP40-205ENST00000479782 ZNF264O43296 627 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 EIF4E2O60573 245 aaKnown RBP12.99□□□□□ -0.33
RPP40-205ENST00000479782 ANGPTL1O95841 491 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 IFNA8P32881 189 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 CASRP41180 1078 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 HLCSP50747 726 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 ZNF136P52737 540 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 SESN3P58005 492 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 PLAURQ03405 335 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 SKP2Q13309 424 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 CD226Q15762 336 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 NPTX1Q15818 432 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 AGAP7PQ5VUJ5 663 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 APOOLQ6UXV4 268 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 DEF8Q6ZN54 512 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 RTL4Q6ZR62 310 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 MARCH3Q86UD3 253 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 BEST3Q8N1M1 668 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 OR10G3Q8NGC4 313 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 PAQR8Q8TEZ7 354 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 PHF10Q8WUB8 498 aaKnown RBP12.99□□□□□ -0.33
RPP40-205ENST00000479782 CNOT9Q92600 299 aaKnown RBP12.99□□□□□ -0.33
RPP40-205ENST00000479782 PRRC1Q96M27 445 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 AGAP4Q96P64 663 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 WFDC6Q9BQY6 131 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 LAT2Q9GZY6 243 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 SDHAF3Q9NRP4 125 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 STMN3Q9NZ72 180 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 KLRF1Q9NZS2 232 aa12.99□□□□□ -0.33
RPP40-205ENST00000479782 FRS3O43559 492 aa12.98□□□□□ -0.33
RPP40-205ENST00000479782 UBTFL6P0CB48 400 aaPredicted RBP12.98□□□□□ -0.33
RPP40-205ENST00000479782 CYB561P49447 251 aa12.98□□□□□ -0.33
RPP40-205ENST00000479782 SMIM11AP58511 58 aa12.98□□□□□ -0.33
RPP40-205ENST00000479782 C17orf67Q0P5P2 114 aa12.98□□□□□ -0.33
RPP40-205ENST00000479782 BROXQ5VW32 411 aa12.98□□□□□ -0.33
RPP40-205ENST00000479782 SLC22A10Q63ZE4 541 aa12.98□□□□□ -0.33
RPP40-205ENST00000479782 SLC30A6Q6NXT4 461 aa12.98□□□□□ -0.33
RPP40-205ENST00000479782 CCDC81Q6ZN84 652 aa12.98□□□□□ -0.33
RPP40-205ENST00000479782 AMIGO2Q86SJ2 522 aa12.98□□□□□ -0.33
RPP40-205ENST00000479782 ZNF605Q86T29 641 aa12.98□□□□□ -0.33
RPP40-205ENST00000479782 RBM45Q8IUH3 476 aaKnown RBP12.98□□□□□ -0.33
RPP40-205ENST00000479782 APLFQ8IW19 511 aaPredicted RBP12.98□□□□□ -0.33
RPP40-205ENST00000479782 SPACA3Q8IXA5 215 aa12.98□□□□□ -0.33
RPP40-205ENST00000479782 CYP4Z2PQ8N1L4 340 aa12.98□□□□□ -0.33
RPP40-205ENST00000479782 TOR1AIP2Q8NFQ8 470 aa12.98□□□□□ -0.33
RPP40-205ENST00000479782 EPYCQ99645 322 aa12.98□□□□□ -0.33
RPP40-205ENST00000479782 MCHR1Q99705 422 aa12.98□□□□□ -0.33
RPP40-205ENST00000479782 ZNF559Q9BR84 538 aa12.98□□□□□ -0.33
RPP40-205ENST00000479782 OSBPL11Q9BXB4 747 aa12.98□□□□□ -0.33
RPP40-205ENST00000479782 SEMA6AQ9H2E6 1030 aa12.98□□□□□ -0.33
RPP40-205ENST00000479782 METTL7AQ9H8H3 244 aa12.98□□□□□ -0.33
RPP40-205ENST00000479782 REEP1Q9H902 201 aa12.98□□□□□ -0.33
RPP40-205ENST00000479782 CPNE5Q9HCH3 593 aa12.98□□□□□ -0.33
RPP40-205ENST00000479782 SH2D2AQ9NP31 389 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms