RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 LCN1P31025 176 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 CPOXP36551 454 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 TXNL4AP83876 142 aaKnown RBP14.45□□□□□ -0.1
COPS3-207ENST00000477299 ZNF117Q03924 483 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 LIPEQ05469 1076 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 HYAL4Q2M3T9 481 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 EIPR1Q53HC9 387 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 FGD2Q7Z6J4 655 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 YRDCQ86U90 279 aaKnown RBP14.45□□□□□ -0.1
COPS3-207ENST00000477299 COMTD1Q86VU5 262 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 PLCZ1Q86YW0 608 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 RNF148Q8N7C7 305 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 FADS6Q8N9I5 356 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 NR4A3Q92570 626 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 CNOT9Q92600 299 aaKnown RBP14.45□□□□□ -0.1
COPS3-207ENST00000477299 SLX1AQ9BQ83 275 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 HOXD1Q9GZZ0 328 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 ZNF703Q9H7S9 590 aaPredicted RBP14.45□□□□□ -0.1
COPS3-207ENST00000477299 POLE3Q9NRF9 147 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 OLAHQ9NV23 265 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 RLIMQ9NVW2 624 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 BOKQ9UMX3 212 aaPredicted RBP14.45□□□□□ -0.1
COPS3-207ENST00000477299 CORO2BQ9UQ03 480 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 C15orf41Q9Y2V0 281 aa14.45□□□□□ -0.1
COPS3-207ENST00000477299 FASNP49327 2511 aaKnown RBP14.45□□□□□ -0.1
COPS3-207ENST00000477299 A0A0G2JPF8 293 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 A0A1W2PQD3 144 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 HNRNPCL2B2RXH8 293 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 HNRNPCL3B7ZW38 293 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 SHISA8B8ZZ34 492 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 C5orf58C9J3I9 102 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 TFECO14948 347 aaPredicted RBP14.44□□□□□ -0.1
COPS3-207ENST00000477299 ZIC3O60481 467 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 TPST1O60507 370 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 CDC40O60508 579 aaKnown RBP eCLIP14.44□□□□□ -0.1
COPS3-207ENST00000477299 HNRNPCL1O60812 293 aaKnown RBP14.44□□□□□ -0.1
COPS3-207ENST00000477299 TRAPPC6AO75865 159 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 CRYABP02511 175 aaKnown RBP14.44□□□□□ -0.1
COPS3-207ENST00000477299 GUSBP08236 651 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 HNRNPCL4P0DMR1 293 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 HPGDP15428 266 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 GDF1P27539 372 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 CRYBA2P53672 197 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 CRISP3P54108 245 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 HPCAP84074 193 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 FGFBP1Q14512 234 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 TOMM34Q15785 309 aaPredicted RBP14.44□□□□□ -0.1
COPS3-207ENST00000477299 INAQ16352 499 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 GLIPR1L2Q4G1C9 344 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 WIPI1Q5MNZ9 446 aaPredicted RBP14.44□□□□□ -0.1
COPS3-207ENST00000477299 REEP3Q6NUK4 255 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 ARSKQ6UWY0 536 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 ZNF836Q6ZNA1 936 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 SERPINA11Q86U17 422 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 SPPL2CQ8IUH8 684 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 CHERPQ8IWX8 916 aaKnown RBP14.44□□□□□ -0.1
COPS3-207ENST00000477299 CLIP4Q8N3C7 705 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 FAM156AQ8NDB6 213 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 RBM15BQ8NDT2 890 aaKnown RBP14.44□□□□□ -0.1
COPS3-207ENST00000477299 OR5M1Q8NGP8 315 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 HOPXQ9BPY8 73 aaPredicted RBP14.44□□□□□ -0.1
COPS3-207ENST00000477299 WFDC6Q9BQY6 131 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 SLC6A15Q9H2J7 730 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 ZDHHC11Q9H8X9 412 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 BCL2L10Q9HD36 194 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 L3MBTL1Q9Y468 752 aa14.44□□□□□ -0.1
COPS3-207ENST00000477299 CYP7B1O75881 506 aa14.43□□□□□ -0.1
COPS3-207ENST00000477299 EPPINO95925 133 aa14.43□□□□□ -0.1
COPS3-207ENST00000477299 OPN1SWP03999 348 aa14.43□□□□□ -0.1
COPS3-207ENST00000477299 MSX2P35548 267 aaPredicted RBP14.43□□□□□ -0.1
COPS3-207ENST00000477299 PGM1P36871 562 aa14.43□□□□□ -0.1
COPS3-207ENST00000477299 CLK3P49761 638 aaKnown RBP14.43□□□□□ -0.1
COPS3-207ENST00000477299 GSK3BP49841 420 aa14.43□□□□□ -0.1
COPS3-207ENST00000477299 DMTNQ08495 405 aa14.43□□□□□ -0.1
COPS3-207ENST00000477299 C17orf67Q0P5P2 114 aa14.43□□□□□ -0.1
COPS3-207ENST00000477299 TOMM20Q15388 145 aa14.43□□□□□ -0.1
COPS3-207ENST00000477299 ZNF630Q2M218 657 aaPredicted RBP14.43□□□□□ -0.1
COPS3-207ENST00000477299 VMACQ2NL98 169 aa14.43□□□□□ -0.1
COPS3-207ENST00000477299 C6orf89Q6UWU4 347 aa14.43□□□□□ -0.1
COPS3-207ENST00000477299 MTERF4Q7Z6M4 381 aaKnown RBP14.43□□□□□ -0.1
COPS3-207ENST00000477299 SLC22A16Q86VW1 577 aa14.43□□□□□ -0.1
COPS3-207ENST00000477299 DEFB107AQ8IZN7 70 aa14.43□□□□□ -0.1
COPS3-207ENST00000477299 C11orf65Q8NCR3 313 aa14.43□□□□□ -0.1
COPS3-207ENST00000477299 FAM83FQ8NEG4 500 aaPredicted RBP14.43□□□□□ -0.1
COPS3-207ENST00000477299 OR52P1PQ8NH57 321 aa14.43□□□□□ -0.1
COPS3-207ENST00000477299 MIB2Q96AX9 1013 aa14.43□□□□□ -0.1
COPS3-207ENST00000477299 CDRT15Q96T59 188 aa14.43□□□□□ -0.1
COPS3-207ENST00000477299 SH3GL1Q99961 368 aa14.43□□□□□ -0.1
COPS3-207ENST00000477299 THUMPD1Q9NXG2 353 aaKnown RBP14.43□□□□□ -0.1
COPS3-207ENST00000477299 TMEM181Q9P2C4 612 aa14.43□□□□□ -0.1
COPS3-207ENST00000477299 SLC6A5Q9Y345 797 aa14.43□□□□□ -0.1
COPS3-207ENST00000477299 KIAA1549Q9HCM3 1950 aa14.43□□□□□ -0.1
COPS3-207ENST00000477299 GCN1Q92616 2671 aaKnown RBP14.43□□□□□ -0.1
COPS3-207ENST00000477299 ESPL1Q14674 2120 aa14.42□□□□□ -0.1
COPS3-207ENST00000477299 ZNF462Q96JM2 2506 aa14.42□□□□□ -0.1
COPS3-207ENST00000477299 MPDZO75970 2070 aa14.42□□□□□ -0.1
COPS3-207ENST00000477299 IGLV3-32A0A0A0MS00 114 aa14.42□□□□□ -0.1
COPS3-207ENST00000477299 M0QX08 132 aa14.42□□□□□ -0.1
COPS3-207ENST00000477299 GTPBP1O00178 669 aaKnown RBP14.42□□□□□ -0.1
COPS3-207ENST00000477299 FRS3O43559 492 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms