RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 NINQ8N4C6 2090 aa3.81□□□□□ -1.8
USP16-205ENST00000474835 TEX13CA0A0J9YWL9 993 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 IRGMA1A4Y4 181 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 PHYHO14832 338 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 SDC3O75056 442 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 CDC123O75794 336 aaPredicted RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 CRYBA1P05813 215 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 H1F0P07305 194 aaKnown RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 EPXP11678 715 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 MMP11P24347 488 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 AKT1P31749 480 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 ARL1P40616 181 aaPredicted RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 RGRP47804 291 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 TPI1P60174 286 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 UBE2IP63279 158 aaKnown RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 CLN3Q13286 438 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 FGFBP1Q14512 234 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 CHRNA6Q15825 494 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 MAPK14Q16539 360 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 CDNFQ49AH0 187 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 LDLRAD1Q5T700 205 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 TMEM268Q5VZI3 342 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 LIPJQ5W064 366 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 GRHL2Q6ISB3 625 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 HEPHL1Q6MZM0 1159 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 SFXN4Q6P4A7 337 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 RASSF6Q6ZTQ3 369 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 ADCK2Q7Z695 626 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 ADGRD2Q7Z7M1 963 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 LDB1Q86U70 411 aaPredicted RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 TRAPPC5Q8IUR0 188 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 FAM9CQ8IZT9 166 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 TMEM86AQ8N2M4 240 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 SIRT6Q8N6T7 355 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 POMGNT2Q8NAT1 580 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 OR56A3Q8NH54 315 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 PPTC7Q8NI37 304 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 ABHD4Q8TB40 342 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 PIH1D2Q8WWB5 315 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 ST8SIA2Q92186 375 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 PHYHIPQ92561 330 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 NELL1Q92832 810 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 RFT1Q96AA3 541 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 ZNF845Q96IR2 970 aaPredicted RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 RBCK1Q9BYM8 510 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 PDGFDQ9GZP0 370 aaPredicted RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 NRSN2Q9GZP1 204 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 AICDAQ9GZX7 198 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 PIGMQ9H3S5 423 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 BRD9Q9H8M2 597 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 REEP1Q9H902 201 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 IL21RQ9HBE5 538 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 MYNNQ9NPC7 610 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 BIN3Q9NQY0 253 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 SNTG1Q9NSN8 517 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 ACTR10Q9NZ32 417 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 ABRACLQ9P1F3 81 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 RBPJLQ9UBG7 517 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 CACNG4Q9UBN1 327 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 GULP1Q9UBP9 304 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 FOXJ3Q9UPW0 622 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 NTNG1Q9Y2I2 539 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 MRPS18CQ9Y3D5 142 aaKnown RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 IPPQ9Y573 584 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 PRSS21Q9Y6M0 314 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 CLCA3PQ9Y6N3 262 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 HTTP42858 3142 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 FANCMQ8IYD8 2048 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 C10orf142B7Z368 130 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 GABARAPH6UMI1 98 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 TLR4O00206 839 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 TNFRSF11BO00300 401 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 TLR5O60602 858 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 YPEL1O60688 119 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 SH3BGRLO75368 114 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 DIRAS1O95057 198 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 HTR3BO95264 441 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 ABHD16AO95870 558 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 MT-CO1P00395 513 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 GNRH1P01148 92 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 PKMP14618 531 aaKnown RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 ATF1P18846 271 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 RORAP35398 523 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 CSKP41240 450 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 CENPAP49450 140 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 DGCR2P98153 550 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 CSTF1Q05048 431 aaKnown RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 RPA4Q13156 261 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 PRDX4Q13162 271 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 MELKQ14680 651 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 NDUFA9Q16795 377 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 FAM74A1Q5RGS3 127 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 ZNF648Q5T619 568 aaPredicted RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 SLC6A19Q695T7 634 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 NCEH1Q6PIU2 408 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 D2HGDHQ8N465 521 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 LINC00471Q8N535 108 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 TBC1D19Q8N5T2 526 aa3.8□□□□□ -1.8
USP16-205ENST00000474835 SIDT2Q8NBJ9 832 aaKnown RBP3.8□□□□□ -1.8
USP16-205ENST00000474835 OR6N1Q8NGY5 312 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms