RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 DGCR2P98153 550 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 DPTQ07507 201 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 RPA4Q13156 261 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 EXOSC2Q13868 293 aaKnown RBP12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 C9orf64Q5T6V5 341 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 C18orf63Q68DL7 685 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 MEPCEQ7L2J0 689 aaKnown RBP12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 ANKRD33Q7Z3H0 272 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 ZNF687Q8N1G0 1237 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 C17orf47Q8NEP4 570 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 BEST4Q8NFU0 473 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 GANCQ8TET4 914 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 VWCEQ96DN2 955 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 PTTG3PQ9NZH4 202 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 ZMIZ1Q9ULJ6 1067 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 CLEC4AQ9UMR7 237 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 GPR171O14626 319 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 REM1O75628 298 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 PAICSP22234 425 aaKnown RBP12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 PDX1P52945 283 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 SLC3A1Q07837 685 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 MESP2Q0VG99 397 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 GSG1Q2KHT4 349 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 CDC73Q6P1J9 531 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 CEACAM19Q7Z692 300 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 ADGRD2Q7Z7M1 963 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 LSMEM1Q8N8F7 131 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 ABHD4Q8TB40 342 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 CACNG6Q9BXT2 260 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 PCBD2Q9H0N5 130 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 CDCP1Q9H5V8 836 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 TRIM36Q9NQ86 728 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 COQ3Q9NZJ6 369 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 TMEM5Q9Y2B1 443 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 RNF215Q9Y6U7 377 aa12.1□□□□□ -0.47
PDZRN3-205ENST00000466780 MEIKINA0A087WXM9 373 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 A0A0B4J203 849 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 DAPL1A0PJW8 107 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 PLPP2O43688 288 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 FGF18O76093 207 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 CXCL14O95715 111 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 AIFM1O95831 613 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 ANKRD34CP0C6C1 535 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 SULT1A3P0DMM9 295 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 SULT1A4P0DMN0 295 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 PRKAR1BP31321 381 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 GALEQ14376 348 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 SLC9A5Q14940 896 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 MFSD13AQ14CX5 517 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 HACD4Q5VWC8 232 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 PXKQ7Z7A4 578 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 LUZP2Q86TE4 346 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 COMMD7Q86VX2 200 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 GID4Q8IVV7 300 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 TOMM5Q8N4H5 51 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 KREMEN2Q8NCW0 462 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 C7orf57Q8NEG2 295 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 NUP43Q8NFH3 380 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 OR10H4Q8NGA5 316 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 OR4D9Q8NGE8 314 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 OR9A2Q8NGT5 310 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 ADAMTS14Q8WXS8 1223 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 PITHD1Q9GZP4 211 aaPredicted RBP12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 DLL4Q9NR61 685 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 CES1P1Q9UKY3 287 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 SLC7A7Q9UM01 511 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 STON1Q9Y6Q2 735 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 MYO7AQ13402 2215 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 MDC1Q14676 2089 aaKnown RBP12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 G3V3Q6 166 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 CDK2AP1O14519 115 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 EMC8O43402 210 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 SC5DO75845 299 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 OR7A10O76100 309 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 CFDP00746 253 aaPredicted RBP12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 BCL6P41182 706 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 ZNF81P51508 661 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 CLDN2P57739 230 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 SNTA1Q13424 505 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 AGERQ15109 404 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 ZNF77Q15935 545 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 MRM1Q6IN84 353 aaKnown RBP12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 TMEM65Q6PI78 240 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 RPTNQ6XPR3 784 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 TPRA1Q86W33 373 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 HAVCR2Q8TDQ0 301 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 SMAP2Q8WU79 429 aaPredicted RBP12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 GIMAP1Q8WWP7 306 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 ARMC5Q96C12 935 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 ZSWIM3Q96MP5 696 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 RBP7Q96R05 134 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 C1QTNF7Q9BXJ2 289 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 OR52D1Q9H346 318 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 PRDM7Q9NQW5 492 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 NLGN3Q9NZ94 848 aa12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.09□□□□□ -0.47
PDZRN3-205ENST00000466780 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.08□□□□□ -0.48
PDZRN3-205ENST00000466780 ERI3O43414 337 aaKnown RBP12.08□□□□□ -0.48
PDZRN3-205ENST00000466780 OR5F1O95221 314 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms