RNA–Protein interactions for RNA: ENST00000466274.1

NCL-208, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 671 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-208ENST00000466274 CCT6BQ92526 530 aa5.12□□□□□ -1.59
NCL-208ENST00000466274 RIT1Q92963 219 aa5.12□□□□□ -1.59
NCL-208ENST00000466274 TMEM186Q96B77 213 aa5.12□□□□□ -1.59
NCL-208ENST00000466274 TMCO6Q96DC7 493 aa5.12□□□□□ -1.59
NCL-208ENST00000466274 MS4A6EQ96DS6 147 aa5.12□□□□□ -1.59
NCL-208ENST00000466274 MFSD3Q96ES6 412 aa5.12□□□□□ -1.59
NCL-208ENST00000466274 CSF3RQ99062 836 aa5.12□□□□□ -1.59
NCL-208ENST00000466274 ERVK-6Q9BXR3 956 aa5.12□□□□□ -1.59
NCL-208ENST00000466274 RSPO3Q9BXY4 272 aaPredicted RBP5.12□□□□□ -1.59
NCL-208ENST00000466274 TRIM54Q9BYV2 358 aa5.12□□□□□ -1.59
NCL-208ENST00000466274 REXO4Q9GZR2 422 aaKnown RBP5.12□□□□□ -1.59
NCL-208ENST00000466274 CCDC68Q9H2F9 335 aa5.12□□□□□ -1.59
NCL-208ENST00000466274 C10orf88Q9H8K7 445 aa5.12□□□□□ -1.59
NCL-208ENST00000466274 PELI2Q9HAT8 420 aa5.12□□□□□ -1.59
NCL-208ENST00000466274 FOLH1BQ9HBA9 442 aa5.12□□□□□ -1.59
NCL-208ENST00000466274 PARVBQ9HBI1 364 aa5.12□□□□□ -1.59
NCL-208ENST00000466274 MYNNQ9NPC7 610 aa5.12□□□□□ -1.59
NCL-208ENST00000466274 FBXO34Q9NWN3 711 aa5.12□□□□□ -1.59
NCL-208ENST00000466274 MARCH4Q9P2E8 410 aaPredicted RBP5.12□□□□□ -1.59
NCL-208ENST00000466274 FBXO9Q9UK97 447 aaPredicted RBP5.12□□□□□ -1.59
NCL-208ENST00000466274 ERVK-19Q9WJR5 959 aa5.12□□□□□ -1.59
NCL-208ENST00000466274 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.12□□□□□ -1.59
NCL-208ENST00000466274 hCG_1818297A0A087WSY0 165 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 A0A087X0T9 212 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 A0A0G2JN53 185 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 GOLGA8QA0A0J9YX86 632 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 LOC100653049A0A140TA62 436 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 GOLGA8OA6NCC3 632 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 LRIT2A6NDA9 550 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 GOLGA8NF8WBI6 632 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 GOLGA8RI6L899 631 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 PSTPIP1O43586 416 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 KRT34O76011 436 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 SYNGR4O95473 234 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 STAMBPO95630 424 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 GASTP01350 101 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 ELANEP08246 267 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 NUDT17P0C025 328 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 FAM228BP0C875 321 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 PABPC4LP0CB38 370 aaKnown RBP5.11□□□□□ -1.59
NCL-208ENST00000466274 CPN2P22792 545 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 PRTN3P24158 256 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 ABCD3P28288 659 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 GALNSP34059 522 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 GYS2P54840 703 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 CLDN15P56746 228 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 LOXL3P58215 753 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 SNRPD2P62316 118 aaKnown RBP5.11□□□□□ -1.59
NCL-208ENST00000466274 BLOC1S1P78537 153 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 ID2Q02363 134 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 RASGEF1BQ0VAM2 473 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 ITGADQ13349 1161 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 KLF1Q13351 362 aaPredicted RBP5.11□□□□□ -1.59
NCL-208ENST00000466274 CTBP1Q13363 440 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 TCHHL1Q5QJ38 904 aaPredicted RBP5.11□□□□□ -1.59
NCL-208ENST00000466274 ZNF362Q5T0B9 420 aaPredicted RBP5.11□□□□□ -1.59
NCL-208ENST00000466274 RAET1LQ5VY80 246 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 FAHD2BQ6P2I3 314 aaPredicted RBP5.11□□□□□ -1.59
NCL-208ENST00000466274 CYHR1Q6ZMK1 362 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 BBS12Q6ZW61 710 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 BHLHA15Q7RTS1 189 aaPredicted RBP5.11□□□□□ -1.59
NCL-208ENST00000466274 ST13P4Q8IZP2 240 aaPredicted RBP5.11□□□□□ -1.59
NCL-208ENST00000466274 KRT78Q8N1N4 520 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 METTL25Q8N6Q8 603 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 WDSUB1Q8N9V3 476 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 BBOF1Q8ND07 529 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 TOR1AIP2Q8NFQ8 470 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 OR2L5Q8NG80 312 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 OR4K17Q8NGC6 315 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 OR56A1Q8NGH5 318 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 OR2W6PQ8NHA6 318 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 NANPQ8TBE9 248 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 MRAPQ8TCY5 172 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 LPGAT1Q92604 370 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 KCNJ9Q92806 393 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 TANKQ92844 425 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 NEIL2Q969S2 332 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 PPWD1Q96BP3 646 aaKnown RBP5.11□□□□□ -1.59
NCL-208ENST00000466274 NXNL1Q96CM4 212 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 MTBPQ96DY7 904 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 FAHD2AQ96GK7 314 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 ZNF778Q96MU6 729 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 SNX18Q96RF0 628 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 SLC6A7Q99884 636 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 INPP5KQ9BT40 448 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 FKRPQ9H9S5 495 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 GALNT9Q9HCQ5 603 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 EMC7Q9NPA0 242 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 SLC52A3Q9NQ40 469 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 MS4A12Q9NXJ0 267 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 TESQ9UGI8 421 aaKnown RBP5.11□□□□□ -1.59
NCL-208ENST00000466274 AP4B1Q9Y6B7 739 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 KCNE2Q9Y6J6 123 aa5.11□□□□□ -1.59
NCL-208ENST00000466274 ANKDD1BA6NHY2 528 aa5.1□□□□□ -1.59
NCL-208ENST00000466274 CXorf49A8MYA2 514 aaPredicted RBP5.1□□□□□ -1.59
NCL-208ENST00000466274 E7EVH7 732 aa5.1□□□□□ -1.59
NCL-208ENST00000466274 ZIC3O60481 467 aa5.1□□□□□ -1.59
NCL-208ENST00000466274 PRKRAO75569 313 aaKnown RBP5.1□□□□□ -1.59
NCL-208ENST00000466274 GCM2O75603 506 aaPredicted RBP5.1□□□□□ -1.59
NCL-208ENST00000466274 PDE5AO76074 875 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms