RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 ACOT8O14734 319 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 PGRMC2O15173 223 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 GALR3O60755 368 aaPredicted RBP6.82□□□□□ -1.32
UBE4B-204ENST00000462658 DNAJB6O75190 326 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 BCAS2O75934 225 aaPredicted RBP6.82□□□□□ -1.32
UBE4B-204ENST00000462658 ATP6V1G2O95670 118 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 AIFM1O95831 613 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 C6orf47O95873 294 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 RPLP0P05388 317 aaKnown RBP6.82□□□□□ -1.32
UBE4B-204ENST00000462658 RETP07949 1114 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 ITGA5P08648 1049 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 ZNF883P0CG24 379 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 ZCCHC18P0CG32 403 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 CKMT1AP12532 417 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 HSD17B1P14061 328 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 HOXB9P17482 250 aaPredicted RBP6.82□□□□□ -1.32
UBE4B-204ENST00000462658 IL1RNP18510 177 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 CPN2P22792 545 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 PTPN6P29350 595 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 GSK3BP49841 420 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 MTPNP58546 118 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 ACTR3P61158 418 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 CCL7P80098 99 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 TRAP1Q12931 704 aaKnown RBP6.82□□□□□ -1.32
UBE4B-204ENST00000462658 RUNX2Q13950 521 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 SELPLGQ14242 412 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 FLOT2Q14254 428 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 NDUFA9Q16795 377 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 TCTE1Q5JU00 501 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 C18orf63Q68DL7 685 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 PRSS41Q7RTY9 318 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 PRSS42Q7Z5A4 293 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 IFNEQ86WN2 208 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 KMT5CQ86Y97 462 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 GALNT4Q8N4A0 578 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 GOT1L1Q8NHS2 421 aaPredicted RBP6.82□□□□□ -1.32
UBE4B-204ENST00000462658 ADAMTS18Q8TE60 1221 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 OR5P2Q8WZ92 322 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 STMN2Q93045 179 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 EXOSC8Q96B26 276 aaKnown RBP6.82□□□□□ -1.32
UBE4B-204ENST00000462658 ASB9Q96DX5 294 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 AURKBQ96GD4 344 aaPredicted RBP6.82□□□□□ -1.32
UBE4B-204ENST00000462658 SLC41A2Q96JW4 573 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 ZNF285Q96NJ3 590 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 KCTD14Q9BQ13 255 aaPredicted RBP6.82□□□□□ -1.32
UBE4B-204ENST00000462658 ECSITQ9BQ95 431 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 SPRTNQ9H040 489 aaPredicted RBP6.82□□□□□ -1.32
UBE4B-204ENST00000462658 LRRN3Q9H3W5 708 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 ANKHQ9HCJ1 492 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 SLC35C2Q9NQQ7 365 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 IRAK4Q9NWZ3 460 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 MS4A12Q9NXJ0 267 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 TAS2R7Q9NYW3 318 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 C5AR2Q9P296 337 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 PTGFRNQ9P2B2 879 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 ZNF282Q9UDV7 671 aaPredicted RBP6.82□□□□□ -1.32
UBE4B-204ENST00000462658 PHF11Q9UIL8 331 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 UTS2RQ9UKP6 389 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 PSME2Q9UL46 239 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 ERVK-11Q9UQG0 969 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 AP3M1Q9Y2T2 418 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 NAALAD2Q9Y3Q0 740 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 NEUROG3Q9Y4Z2 214 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 PCDH15Q96QU1 1955 aa6.82□□□□□ -1.32
UBE4B-204ENST00000462658 TMEM131Q92545 1883 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 CABIN1Q9Y6J0 2220 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 CNOT1A5YKK6 2376 aaKnown RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 WDFY3Q8IZQ1 3526 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 TP53BP1Q12888 1972 aaPredicted RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 CCDC187A0A096LP49 1063 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 A0A1W2PQM1 296 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 HYKKA2RU49 373 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 WIPF3A6NGB9 483 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 ZNF860A6NHJ4 632 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 GLOD5A6NK44 160 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 LINC01548A6NM66 108 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 EVPLLA8MZ36 301 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 TMEM150CB9EJG8 249 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 SGK494L7N484 410 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 CASC3O15234 703 aaKnown RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 TOX3O15405 576 aaPredicted RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 RBMXL2O75526 392 aaKnown RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 PRKRAO75569 313 aaKnown RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 ERAL1O75616 437 aaKnown RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 SNRNP200O75643 2136 aaKnown RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 STAMBPO95630 424 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 CPNE6O95741 557 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 LDOC1O95751 146 aaPredicted RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 CSTBP04080 98 aaKnown RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 ABCB1P08183 1280 aaPredicted RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 ZNF806P0C7X5 589 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 NELFEP18615 380 aaKnown RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 PPIBP23284 216 aaKnown RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 HTR1EP28566 365 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 TLX1P31314 330 aaPredicted RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 FRKP42685 505 aaPredicted RBP6.81□□□□□ -1.32
UBE4B-204ENST00000462658 GRK6P43250 576 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 ERFP50548 548 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 LIM2P55344 173 aa6.81□□□□□ -1.32
UBE4B-204ENST00000462658 TUBA4AP68366 448 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms