RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 ABCC3O15438 1527 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 LMTK2Q8IWU2 1503 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 ARAP3Q8WWN8 1544 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 LRIT2A6NDA9 550 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 G3V2L1 256 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 K7ERI5 159 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 WRBO00258 174 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 FOXE1O00358 373 aaPredicted RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 CYB561D2O14569 222 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 CASKO14936 926 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 RANBP6O60518 1105 aaKnown RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 DNAJB6O75190 326 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 MTRF1O75570 445 aaKnown RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 BBOX1O75936 387 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 ZNF432O94892 652 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 TOXO94900 526 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 OAS1P00973 400 aaKnown RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 POLR2MP0CAP2 368 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 ADORA3P0DMS8 318 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 ANXA3P12429 323 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 CD1DP15813 335 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 LAP3P28838 519 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 FCGR2CP31995 323 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 MMP12P39900 470 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 CCT6AP40227 531 aaKnown RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 MAGEA5P43359 124 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 OSTNP61366 133 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 PHEXP78562 749 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 CSTF1Q05048 431 aaKnown RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 CHI3L2Q15782 390 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 DPYSL2Q16555 572 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 SYPL1Q16563 259 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 ECSCRQ19T08 205 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 FAM76BQ5HYJ3 339 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 BIVMQ86UB2 503 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 APLFQ8IW19 511 aaPredicted RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 ZNF321PQ8N8H1 164 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 CCDC112Q8NEF3 446 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 FAM3CQ92520 227 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 ANKRD27Q96NW4 1050 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 GSDMAQ96QA5 445 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 ZNF300Q96RE9 604 aaPredicted RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 TNFRSF13CQ96RJ3 184 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 CITED1Q99966 193 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 SLC39A3Q9BRY0 314 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 RPP25Q9BUL9 199 aaKnown RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 CLEC7AQ9BXN2 247 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 RHOJQ9H4E5 214 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 GPN2Q9H9Y4 310 aaPredicted RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 SMOXQ9NWM0 555 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 KLRF1Q9NZS2 232 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP2.5□□□□□ -2.01
HPS3-203ENST00000460822 GSTK1Q9Y2Q3 226 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 WDR45Q9Y484 360 aa2.5□□□□□ -2.01
HPS3-203ENST00000460822 TCF20Q9UGU0 1960 aaKnown RBP2.5□□□□□ -2.01
HPS3-203ENST00000460822 KIDINS220Q9ULH0 1771 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 NEXMIFQ5QGS0 1516 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 HECW2Q9P2P5 1572 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 BMPR1BO00238 502 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 EI24O14681 340 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 DUX1O43812 170 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 PCDH7O60245 1069 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 KRTAP5-8O75690 187 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 IGSF6O95976 241 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 PATE4P0C8F1 98 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 STAG3L3P0CL85 134 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 AOC1P19801 751 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 RPL9P32969 192 aaKnown RBP2.49□□□□□ -2.01
HPS3-203ENST00000460822 BRCC3P46736 316 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 PGFP49763 221 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 PLA2G16P53816 162 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 DLX5P56178 289 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 SNRPD1P62314 119 aaKnown RBP2.49□□□□□ -2.01
HPS3-203ENST00000460822 BNIP1Q12981 228 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 EMC2Q15006 297 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 MLF2Q15773 248 aaPredicted RBP2.49□□□□□ -2.01
HPS3-203ENST00000460822 CCDC6Q16204 474 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 STPG1Q5TH74 334 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 CARD17Q5XLA6 110 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 ATL3Q6DD88 541 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 LEG1Q6P5S2 330 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 Q6ZRP5 223 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 TMCO2Q7Z6W1 182 aaPredicted RBP2.49□□□□□ -2.01
HPS3-203ENST00000460822 KCNMB4Q86W47 210 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 LRRC43Q8N309 656 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 PCNPQ8WW12 178 aaKnown RBP2.49□□□□□ -2.01
HPS3-203ENST00000460822 SLCO2A1Q92959 643 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 RAB3CQ96E17 227 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 TGM7Q96PF1 710 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 ALKBH3Q96Q83 286 aaPredicted RBP2.49□□□□□ -2.01
HPS3-203ENST00000460822 RIT2Q99578 217 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 CHRDL1Q9BU40 450 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 DGCR6LQ9BY27 220 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 API5Q9BZZ5 524 aaKnown RBP2.49□□□□□ -2.01
HPS3-203ENST00000460822 SLC25A51Q9H1U9 297 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 Q9HAA7 133 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 WDR41Q9HAD4 459 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 IL1RL2Q9HB29 575 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 ZFP14Q9HCL3 533 aa2.49□□□□□ -2.01
HPS3-203ENST00000460822 POLD4Q9HCU8 107 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms