RNA–Protein interactions for RNA: ENST00000452143.5

USP1-204, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 3

Gene USP1, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-204ENST00000452143 A0A1W2PQD3 144 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 A0A1W2PRB8 838 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 SHISA8B8ZZ34 492 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 INAFM1C9JVW0 142 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 G3V2L1 256 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 GMFGO60234 142 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 UROSP10746 265 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 NEFHP12036 1026 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 HPGDP15428 266 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 AGTR1P30556 359 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 EIF1P41567 113 aaKnown RBP9.73□□□□□ -0.85
USP1-204ENST00000452143 FRKP42685 505 aaPredicted RBP9.73□□□□□ -0.85
USP1-204ENST00000452143 DNAJB13P59910 316 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 SLC18A2Q05940 514 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 KIAA0040Q15053 153 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 ZNF239Q16600 458 aaKnown RBP9.73□□□□□ -0.85
USP1-204ENST00000452143 CCDC153Q494R4 210 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 CFAP157Q5JU67 520 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 PDSS1Q5T2R2 415 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 HBMQ6B0K9 141 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 ADAM5Q6NVV9 412 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 ZCCHC12Q6PEW1 402 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 RNF165Q6ZSG1 346 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 ZNF551Q7Z340 670 aaPredicted RBP9.73□□□□□ -0.85
USP1-204ENST00000452143 GALNT10Q86SR1 603 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 TRABD2AQ86V40 505 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 HOMEZQ8IX15 550 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 STEAP2Q8NFT2 490 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 OR4C3Q8NH37 302 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 RNF128Q8TEB7 428 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 MZB1Q8WU39 189 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 PLPPR2Q96GM1 343 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 KLHL15Q96M94 604 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 RNF145Q96MT1 663 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 GP6Q9HCN6 339 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 UBQLN4Q9NRR5 601 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 ACSS1Q9NUB1 689 aaPredicted RBP9.73□□□□□ -0.85
USP1-204ENST00000452143 MED17Q9NVC6 651 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 C1orf109Q9NX04 203 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 EMCNQ9ULC0 261 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 CLEC4AQ9UMR7 237 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 SNX8Q9Y5X2 465 aa9.73□□□□□ -0.85
USP1-204ENST00000452143 RTTNQ86VV8 2226 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 ABCA1O95477 2261 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 KIAA1324LA8MWY0 1029 aaPredicted RBP9.72□□□□□ -0.85
USP1-204ENST00000452143 SCDO00767 359 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 TNFSF11O14788 317 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 RGS14O43566 566 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 CXCL13O43927 109 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 SEC22BO75396 215 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 SOX30O94993 753 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 KCNK2O95069 426 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 PROCP04070 461 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 NID1P14543 1247 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 DDX5P17844 614 aaKnown RBP9.72□□□□□ -0.85
USP1-204ENST00000452143 SDC1P18827 310 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 ADH6P28332 368 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 SERPINB4P48594 390 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 ATP5J2P56134 94 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 RPS4XP62701 263 aaKnown RBP9.72□□□□□ -0.85
USP1-204ENST00000452143 PDE7AQ13946 482 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 RNPS1Q15287 305 aaKnown RBP9.72□□□□□ -0.85
USP1-204ENST00000452143 CPTPQ5TA50 214 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 MFSD12Q6NUT3 480 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 SZRD1Q7Z422 152 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 WFDC8Q8IUA0 241 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 NUP43Q8NFH3 380 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 FAM110BQ8TC76 370 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 CPNE4Q96A23 557 aaPredicted RBP9.72□□□□□ -0.85
USP1-204ENST00000452143 CIDECQ96AQ7 238 aaPredicted RBP9.72□□□□□ -0.85
USP1-204ENST00000452143 PPCDCQ96CD2 204 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 MTERF3Q96E29 417 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 GIMAP5Q96F15 307 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 REXO5Q96IC2 774 aaKnown RBP9.72□□□□□ -0.85
USP1-204ENST00000452143 EGLN2Q96KS0 407 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 FCRL1Q96LA6 429 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 USB1Q9BQ65 265 aaKnown RBP9.72□□□□□ -0.85
USP1-204ENST00000452143 TACO1Q9BSH4 297 aaKnown RBP9.72□□□□□ -0.85
USP1-204ENST00000452143 HDHD5Q9BXW7 423 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 REEP4Q9H6H4 257 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 LRTM1Q9HBL6 345 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 NGBQ9NPG2 151 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 TIGARQ9NQ88 270 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 TMED5Q9Y3A6 229 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 RNF115Q9Y4L5 304 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 PLCE1Q9P212 2302 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 CR1P17927 2039 aa9.72□□□□□ -0.85
USP1-204ENST00000452143 ANK3Q12955 4377 aaKnown RBP9.71□□□□□ -0.85
USP1-204ENST00000452143 CADP27708 2225 aa9.71□□□□□ -0.85
USP1-204ENST00000452143 A0A0J9YW62 118 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 GJE1A6NN92 205 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 KIF2AO00139 706 aaPredicted RBP9.71□□□□□ -0.86
USP1-204ENST00000452143 SLC28A1O00337 649 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 PLIN3O60664 434 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 ALOX5P09917 674 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 LINGO3P0C6S8 592 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 ACP2P11117 423 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 PRIM2P49643 509 aa9.71□□□□□ -0.86
USP1-204ENST00000452143 PRKAG1P54619 331 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms