RNA–Protein interactions for RNA: ENST00000409945.1

USP40-202, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-202ENST00000409945 GABRA4P48169 554 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 SERPINB9P50453 376 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 TAS2R39P59534 338 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 RPS18P62269 152 aaKnown RBP5.86□□□□□ -1.47
USP40-202ENST00000409945 FAM53BQ14153 422 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 RBBP7Q16576 425 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 FAM83EQ2M2I3 478 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 KBTBD12Q3ZCT8 623 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 CDKL4Q5MAI5 379 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 MORN5Q5VZ52 161 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 HIST2H2AA3Q6FI13 130 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 FAM198BQ6UWH4 519 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 TRILQ7L0X0 811 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 PAQR7Q86WK9 346 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 SLC38A9Q8NBW4 561 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 TTLQ8NG68 377 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 STAG3L4Q8TBR4 150 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 METTL21AQ8WXB1 218 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 TLCD1Q96CP7 247 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 PRAP1Q96NZ9 151 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 GPR22Q99680 433 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 CCDC77Q9BR77 488 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 SLC25A23Q9BV35 468 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 KRTAP4-9Q9BYQ8 210 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 KRTAP4-7Q9BYR0 210 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 ING2Q9H160 280 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 NMRAL1Q9HBL8 299 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 ANKHQ9HCJ1 492 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 MKKSQ9NPJ1 570 aaPredicted RBP5.86□□□□□ -1.47
USP40-202ENST00000409945 WWOXQ9NZC7 414 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 CD274Q9NZQ7 290 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 FBXL17Q9UF56 701 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 ANAPC2Q9UJX6 822 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 PIEZO2Q9H5I5 2752 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 KCNE1BA0A087WTH5 132 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 RGS16O15492 202 aaPredicted RBP5.86□□□□□ -1.47
USP40-202ENST00000409945 DPM1O60762 260 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 CTSVO60911 334 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 IFNA2P01563 188 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 LCATP04180 440 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 SERPIND1P05546 499 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 F7P08709 466 aaPredicted RBP5.86□□□□□ -1.47
USP40-202ENST00000409945 SERPINB8P50452 374 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 CCL11P51671 97 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 MAGOHP61326 146 aaKnown RBP5.86□□□□□ -1.47
USP40-202ENST00000409945 TGM3Q08188 693 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 KLRB1Q12918 225 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 HERC3Q15034 1050 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 ZKSCAN8Q15776 578 aaPredicted RBP5.86□□□□□ -1.47
USP40-202ENST00000409945 LINC00303Q3SY05 128 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 PAGE2BQ5JRK9 111 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 MFSD4BQ5TF39 518 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 FRMPD2BQ6IN97 320 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 ZNF425Q6IV72 752 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 ABHD13Q7L211 337 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 ASPGQ86U10 573 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 NKAIN3Q8N8D7 197 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 TRPV3Q8NET8 790 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 SLC13A3Q8WWT9 602 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 SLC5A11Q8WWX8 675 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 SLC25A28Q96A46 364 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 VMP1Q96GC9 406 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 ZNF285Q96NJ3 590 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 OLFM1Q99784 485 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 SLC26A1Q9H2B4 701 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 PELI2Q9HAT8 420 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 NRIP3Q9NQ35 241 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 STARD5Q9NSY2 213 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 TUBA8Q9NY65 449 aaPredicted RBP5.86□□□□□ -1.47
USP40-202ENST00000409945 GPR83Q9NYM4 423 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 TRPC4Q9UBN4 977 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 C19orf25Q9UFG5 118 aaPredicted RBP5.86□□□□□ -1.47
USP40-202ENST00000409945 RPS6KA6Q9UK32 745 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 ACOT9Q9Y305 439 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 ANGPTL3Q9Y5C1 460 aa5.86□□□□□ -1.47
USP40-202ENST00000409945 A0A087WUV0 522 aaPredicted RBP5.85□□□□□ -1.47
USP40-202ENST00000409945 TRBC2A0A5B9 178 aa5.85□□□□□ -1.47
USP40-202ENST00000409945 KRT87PA6NCN2 255 aa5.85□□□□□ -1.47
USP40-202ENST00000409945 H0YIG0 161 aa5.85□□□□□ -1.47
USP40-202ENST00000409945 NDUFAB1O14561 156 aa5.85□□□□□ -1.47
USP40-202ENST00000409945 HAT1O14929 419 aa5.85□□□□□ -1.47
USP40-202ENST00000409945 OR1F1O43749 312 aa5.85□□□□□ -1.47
USP40-202ENST00000409945 SLC28A2O43868 658 aa5.85□□□□□ -1.47
USP40-202ENST00000409945 TSPAN12O95859 305 aa5.85□□□□□ -1.47
USP40-202ENST00000409945 HEXBP07686 556 aa5.85□□□□□ -1.47
USP40-202ENST00000409945 ABHD2P08910 425 aa5.85□□□□□ -1.47
USP40-202ENST00000409945 PCNAP12004 261 aa5.85□□□□□ -1.47
USP40-202ENST00000409945 CDH1P12830 882 aa5.85□□□□□ -1.47
USP40-202ENST00000409945 ICAM2P13598 275 aa5.85□□□□□ -1.47
USP40-202ENST00000409945 IL10P22301 178 aa5.85□□□□□ -1.47
USP40-202ENST00000409945 MMP11P24347 488 aa5.85□□□□□ -1.47
USP40-202ENST00000409945 MSH2P43246 934 aa5.85□□□□□ -1.47
USP40-202ENST00000409945 BPIFB3P59826 476 aa5.85□□□□□ -1.47
USP40-202ENST00000409945 STXBP1P61764 594 aaKnown RBP5.85□□□□□ -1.47
USP40-202ENST00000409945 PHEXP78562 749 aa5.85□□□□□ -1.47
USP40-202ENST00000409945 AIMP2Q13155 320 aaKnown RBP5.85□□□□□ -1.47
USP40-202ENST00000409945 RCN2Q14257 317 aa5.85□□□□□ -1.47
USP40-202ENST00000409945 EFNB3Q15768 340 aa5.85□□□□□ -1.47
USP40-202ENST00000409945 PHKG1Q16816 387 aa5.85□□□□□ -1.47
USP40-202ENST00000409945 Q5PR19 223 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms