RNA–Protein interactions for RNA: ENST00000409754.5

LIMS2-206, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 1 (best) BASIC

Gene LIMS2, Length 1,620 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-206ENST00000409754 CCDC157Q569K6 752 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 VWA2Q5GFL6 755 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 ZNF730Q6ZMV8 503 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 COX15Q7KZN9 410 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 P3H2Q8IVL5 708 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 PLPP5Q8NEB5 264 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 GNPDA2Q8TDQ7 276 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 IPCEF1Q8WWN9 437 aaPredicted RBP13.02□□□□□ -0.33
LIMS2-206ENST00000409754 ACOT11Q8WXI4 607 aaPredicted RBP13.02□□□□□ -0.33
LIMS2-206ENST00000409754 SGCDQ92629 289 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 SLC35B4Q969S0 331 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 SLC46A1Q96NT5 459 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 NODALQ96S42 347 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 YIPF3Q9GZM5 350 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 TGIF2Q9GZN2 237 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 CCNB1IP1Q9NPC3 277 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.02□□□□□ -0.33
LIMS2-206ENST00000409754 PLCXD1Q9NUJ7 323 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 IMPAD1Q9NX62 359 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 NTNG1Q9Y2I2 539 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 OR10H1Q9Y4A9 318 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 PCDHGA1Q9Y5H4 931 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 SNX5Q9Y5X3 404 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 CLCA3PQ9Y6N3 262 aa13.02□□□□□ -0.33
LIMS2-206ENST00000409754 CHD8Q9HCK8 2581 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 IGLV3-12A0A075B6K2 115 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 TRAPPC13A5PLN9 417 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 H3BSA7 217 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 NTN3O00634 580 aaPredicted RBP13.01□□□□□ -0.33
LIMS2-206ENST00000409754 FAM20BO75063 409 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 DDAH2O95865 285 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 THY1P04216 161 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 IGKV3-11P04433 115 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 TP53P04637 393 aaPredicted RBP13.01□□□□□ -0.33
LIMS2-206ENST00000409754 GP1BAP07359 652 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 POU1F1P28069 291 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 PPICP45877 212 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 RFX3P48380 749 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 EFNA3P52797 238 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 ATP12AP54707 1039 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 PMS2P3Q13401 168 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 SMN1Q16637 294 aaKnown RBP13.01□□□□□ -0.33
LIMS2-206ENST00000409754 PDZK1Q5T2W1 519 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 CDCP2Q5VXM1 449 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 SLX4IPQ5VYV7 408 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 XAF1Q6GPH4 301 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 SLITRK4Q8IW52 837 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 NLGN4XQ8N0W4 816 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 BCORP1Q8N888 145 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 OR14A16Q8NHC5 309 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 PIGXQ8TBF5 258 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 ZNF721Q8TF20 911 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 OIT3Q8WWZ8 545 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 ART5Q96L15 291 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 GFM1Q96RP9 751 aaKnown RBP13.01□□□□□ -0.33
LIMS2-206ENST00000409754 VN1R1Q9GZP7 353 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 SLC22A11Q9NSA0 550 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 C14orf105Q9NVL8 296 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 PCDHGB1Q9Y5G3 927 aa13.01□□□□□ -0.33
LIMS2-206ENST00000409754 CCDC160A6NGH7 325 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 H3BN98 237 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 SCRG1O75711 98 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 SOX14O95416 240 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 ONECUT2O95948 504 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 HBQ1P09105 142 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 PRG2P13727 222 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 HTR2AP28223 471 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 LSM11P83369 360 aaKnown RBP eCLIP13□□□□□ -0.33
LIMS2-206ENST00000409754 PLAURQ03405 335 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 TSPAN31Q12999 210 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 TRA2AQ13595 282 aaKnown RBP eCLIP13□□□□□ -0.33
LIMS2-206ENST00000409754 RAB39AQ14964 217 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 NSDHLQ15738 373 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 NEDD8Q15843 81 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 TMEM236Q5W0B7 351 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 C12orf73Q69YU5 71 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 MBOAT2Q6ZWT7 520 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 RRM2BQ7LG56 351 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 PRICKLE2Q7Z3G6 844 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 BPHLQ86WA6 291 aaPredicted RBP13□□□□□ -0.33
LIMS2-206ENST00000409754 NKAIN4Q8IVV8 208 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 CCDC103Q8IW40 242 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 CMIPQ8IY22 773 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 ZSCAN1Q8NBB4 408 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 ZNF540Q8NDQ6 660 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 SLC2A12Q8TD20 617 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 ADAMTS14Q8WXS8 1223 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 DAZLQ92904 295 aaKnown RBP13□□□□□ -0.33
LIMS2-206ENST00000409754 GPA33Q99795 319 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 ZNF559Q9BR84 538 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 OR8D2Q9GZM6 311 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 MKL2Q9ULH7 1088 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 SLC7A7Q9UM01 511 aa13□□□□□ -0.33
LIMS2-206ENST00000409754 SEC16AO15027 2179 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 DMXL2Q8TDJ6 3036 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 A0A1W2PNU3 283 aaPredicted RBP12.99□□□□□ -0.33
LIMS2-206ENST00000409754 MED19A0JLT2 244 aaPredicted RBP12.99□□□□□ -0.33
LIMS2-206ENST00000409754 A8MUA0 341 aa12.99□□□□□ -0.33
LIMS2-206ENST00000409754 POLR1CO15160 346 aaPredicted RBP12.99□□□□□ -0.33
LIMS2-206ENST00000409754 BCAS1O75363 584 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms