RNA–Protein interactions for RNA: ENST00000403461.5

CEACAM1-208, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, human

TSL 1 (best) BASIC

Gene CEACAM1, Length 1,263 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CEACAM1-208	ENST00000403461	SPPL2A	Q8TCT8	520 aa		6.1	□□□□□ -1.43
CEACAM1-208	ENST00000403461	TMEM171	Q8WVE6	324 aa		6.1	□□□□□ -1.43
CEACAM1-208	ENST00000403461	PPWD1	Q96BP3	646 aa	Known RBP	6.1	□□□□□ -1.43
CEACAM1-208	ENST00000403461	INTS12	Q96CB8	462 aa	Known RBP	6.1	□□□□□ -1.43
CEACAM1-208	ENST00000403461	WDR34	Q96EX3	536 aa		6.1	□□□□□ -1.43
CEACAM1-208	ENST00000403461	PIK3IP1	Q96FE7	263 aa		6.1	□□□□□ -1.43
CEACAM1-208	ENST00000403461	CFAP36	Q96G28	342 aa		6.1	□□□□□ -1.43
CEACAM1-208	ENST00000403461	WDYHV1	Q96HA8	205 aa		6.1	□□□□□ -1.43
CEACAM1-208	ENST00000403461	TMEM41A	Q96HV5	264 aa		6.1	□□□□□ -1.43
CEACAM1-208	ENST00000403461	FAM111A	Q96PZ2	611 aa		6.1	□□□□□ -1.43
CEACAM1-208	ENST00000403461	ANGPTL4	Q9BY76	406 aa		6.1	□□□□□ -1.43
CEACAM1-208	ENST00000403461	UBQLN3	Q9H347	655 aa		6.1	□□□□□ -1.43
CEACAM1-208	ENST00000403461	CXorf56	Q9H5V9	222 aa		6.1	□□□□□ -1.43
CEACAM1-208	ENST00000403461	POPDC3	Q9HBV1	291 aa		6.1	□□□□□ -1.43
CEACAM1-208	ENST00000403461	LZTFL1	Q9NQ48	299 aa		6.1	□□□□□ -1.43
CEACAM1-208	ENST00000403461	LYAR	Q9NX58	379 aa	Known RBP	6.1	□□□□□ -1.43
CEACAM1-208	ENST00000403461	NSMCE4A	Q9NXX6	385 aa		6.1	□□□□□ -1.43
CEACAM1-208	ENST00000403461	CD274	Q9NZQ7	290 aa		6.1	□□□□□ -1.43
CEACAM1-208	ENST00000403461	PTBP2	Q9UKA9	531 aa	Known RBP	6.1	□□□□□ -1.43
CEACAM1-208	ENST00000403461	IKZF3	Q9UKT9	509 aa		6.1	□□□□□ -1.43
CEACAM1-208	ENST00000403461	RNF212B	A8MTL3	300 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	OVOL3	O00110	214 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	PGRMC1	O00264	195 aa	Known RBP	6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	SAP18	O00422	153 aa	Known RBP	6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	RTCA	O00442	366 aa	Known RBP	6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	CTIF	O43310	598 aa	Known RBP	6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	TMCC2	O75069	709 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	CRLF1	O75462	422 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	ESRRB	O95718	433 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	GPR75	O95800	540 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	CRH	P06850	196 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	RHOXF2B	P0C7M4	288 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	SLC35E2B	P0CK96	405 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	SLC35E2	P0CK97	266 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	CPN1	P15169	458 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	NAGA	P17050	411 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	PTPN6	P29350	595 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	GGT5	P36269	586 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	HSPA7	P48741	367 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	SEC24C	P53992	1094 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	ATP6V0D1	P61421	351 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	DMTN	Q08495	405 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	FOXF2	Q12947	444 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	SNTA1	Q13424	505 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	DDX39B	Q13838	428 aa	Known RBP	6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	E2F2	Q14209	437 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	FGFBP1	Q14512	234 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	CYP1B1	Q16678	543 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	C18orf21	Q32NC0	220 aa	Predicted RBP	6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	C10orf62	Q5T681	223 aa	Predicted RBP	6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	OR4C11	Q6IEV9	310 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	OR2A2	Q6IF42	318 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	SLC30A6	Q6NXT4	461 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	TTC27	Q6P3X3	843 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	PODNL1	Q6PEZ8	512 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	CYP20A1	Q6UW02	462 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	LRRC70	Q7Z2Q7	622 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	YRDC	Q86U90	279 aa	Known RBP	6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	IFNE	Q86WN2	208 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	MYLK4	Q86YV6	388 aa	Predicted RBP	6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	CIART	Q8N365	385 aa	Predicted RBP	6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	CNEP1R1	Q8N9A8	125 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	SPC24	Q8NBT2	197 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	FAM83F	Q8NEG4	500 aa	Predicted RBP	6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	C17orf47	Q8NEP4	570 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	TOR1AIP2	Q8NFQ8	470 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	SVIP	Q8NHG7	77 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	ZNF473	Q8WTR7	871 aa	Known RBP	6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	CAVIN3	Q969G5	261 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	REPS1	Q96D71	796 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	LRRC39	Q96DD0	335 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	PBK	Q96KB5	322 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	SFXN2	Q96NB2	322 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	TUBA1C	Q9BQE3	449 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	TMEM79	Q9BSE2	394 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	OSBPL11	Q9BXB4	747 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	MS4A8	Q9BY19	250 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	ACTRT3	Q9BYD9	372 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	DERL2	Q9GZP9	239 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	ACTR8	Q9H981	624 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	PROK2	Q9HC23	129 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	FANCF	Q9NPI8	374 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	KLHL28	Q9NXS3	571 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	KLRF1	Q9NZS2	232 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	C6orf203	Q9P0P8	240 aa	Predicted RBP	6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	TXNDC16	Q9P2K2	825 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	SLC17A6	Q9P2U8	582 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	FETUB	Q9UGM5	382 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	ZNF490	Q9ULM2	529 aa	Predicted RBP	6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	NDRG4	Q9ULP0	352 aa	Known RBP	6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	CFL2	Q9Y281	166 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	HIVEP2	P31629	2446 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	AKAP6	Q13023	2319 aa		6.09	□□□□□ -1.43
CEACAM1-208	ENST00000403461	LOC102723971	A0A1B0GUV8	181 aa		6.08	□□□□□ -1.44
CEACAM1-208	ENST00000403461		A0A1W2PNV4	684 aa		6.08	□□□□□ -1.44
CEACAM1-208	ENST00000403461		A0A1W2PPR1	153 aa		6.08	□□□□□ -1.44
CEACAM1-208	ENST00000403461		A8MXE2	369 aa		6.08	□□□□□ -1.44
CEACAM1-208	ENST00000403461	KDM4E	B2RXH2	506 aa	Predicted RBP	6.08	□□□□□ -1.44
CEACAM1-208	ENST00000403461	DNALI1	O14645	258 aa	Predicted RBP	6.08	□□□□□ -1.44
CEACAM1-208	ENST00000403461	ACOX3	O15254	700 aa		6.08	□□□□□ -1.44

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