RNA–Protein interactions for RNA: ENST00000399916.5

RUNX3-203, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RUNX3, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-203ENST00000399916 SCMH1Q96GD3 660 aa12.95□□□□□ -0.34
RUNX3-203ENST00000399916 THOC3Q96J01 351 aaKnown RBP12.95□□□□□ -0.34
RUNX3-203ENST00000399916 SLC6A7Q99884 636 aa12.95□□□□□ -0.34
RUNX3-203ENST00000399916 DDX31Q9H8H2 851 aaKnown RBP12.95□□□□□ -0.34
RUNX3-203ENST00000399916 KLHL9Q9P2J3 617 aa12.95□□□□□ -0.34
RUNX3-203ENST00000399916 K7EPK0 472 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 LDB2O43679 373 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 GATCO43716 136 aaKnown RBP12.94□□□□□ -0.34
RUNX3-203ENST00000399916 CKMP06732 381 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 ADRA1AP35348 466 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 SELENOPP49908 381 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 C4orf17Q53FE4 359 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 SUSD1Q6UWL2 747 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 COMTD1Q86VU5 262 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 FAM71E2Q8N5Q1 922 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 SLAMF9Q96A28 289 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 RHBDF1Q96CC6 855 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 PEX11GQ96HA9 241 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 ATOH8Q96SQ7 321 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 KXD1Q9BQD3 176 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 RPN2P04844 631 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 ALPPL2P10696 532 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 F3P13726 295 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 MTHFD2P13995 350 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 FDXRP22570 491 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 CD80P33681 288 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 ZDHHC20Q5W0Z9 365 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 CST9Q5W186 159 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 LAMTOR1Q6IAA8 161 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 UBAC2Q8NBM4 344 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 TSEN15Q8WW01 171 aaKnown RBP12.94□□□□□ -0.34
RUNX3-203ENST00000399916 HPSE2Q8WWQ2 592 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 ZNF226Q9NYT6 803 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 CNIH4Q9P003 139 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 LRRC37AA6NMS7 1700 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 CCSO14618 274 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 ST8SIA5O15466 376 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 SLC34A2O95436 690 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 PMP2P02689 132 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 DCNP07585 359 aaKnown RBP12.94□□□□□ -0.34
RUNX3-203ENST00000399916 SFTPBP07988 381 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 AKR1C4P17516 323 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 NME2P22392 152 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 SERPINF1P36955 418 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 NAA10P41227 235 aaPredicted RBP12.94□□□□□ -0.34
RUNX3-203ENST00000399916 MELKQ14680 651 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 OR7A5Q15622 319 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 LAIR1Q6GTX8 287 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 FAM220AQ7Z4H9 259 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 OR4K5Q8NGD3 323 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 EPYCQ99645 322 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 A0A087X0M5 115 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 A0A1B0GX30 115 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 SMCO3A2RU48 225 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 PTGESO14684 152 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 MPC2O95563 127 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 TSPAN15O95858 294 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 TSPAN12O95859 305 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 AHCYP23526 432 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 FAM27D1Q5T7N8 215 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 NHLRC1Q6VVB1 395 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 ZNF852Q6ZMS4 543 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 CBLL1Q75N03 491 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 PGAP1Q75T13 922 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 COMMD2Q86X83 199 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 ACBD7Q8N6N7 88 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 HAVCR1Q96D42 359 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 RRNAD1Q96FB5 475 aaKnown RBP12.94□□□□□ -0.34
RUNX3-203ENST00000399916 MRPL48Q96GC5 212 aaKnown RBP12.94□□□□□ -0.34
RUNX3-203ENST00000399916 SORCS2Q96PQ0 1159 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 SMIM3Q9BZL3 60 aa12.94□□□□□ -0.34
RUNX3-203ENST00000399916 PPP1R2P9O14990 202 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 EPHX1P07099 455 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 ANKRD34CP0C6C1 535 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 SOX18P35713 384 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 FABP5Q01469 135 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 SP3Q02447 781 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 RTP2Q5QGT7 225 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 IER5LQ5T953 404 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 TMED6Q8WW62 240 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 OR8D1Q8WZ84 308 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 RNF170Q96K19 258 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 PCOLCE2Q9UKZ9 415 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 AGO1Q9UL18 857 aaKnown RBP12.93□□□□□ -0.34
RUNX3-203ENST00000399916 MCM3APO60318 1980 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 PRAF2O60831 178 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 MT-ND5P03915 603 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 CCR7P32248 378 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 HLXQ14774 488 aaPredicted RBP12.93□□□□□ -0.34
RUNX3-203ENST00000399916 PSAPL1Q6NUJ1 521 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 HIST2H3AQ71DI3 136 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 KDM8Q8N371 416 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 TLR9Q9NR96 1032 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 COL1A2P08123 1366 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 TRBV4-1A0A0J9YWV2 114 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 MTX2O75431 263 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 KCNE1P15382 129 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 OR52W1Q6IF63 320 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 TMPRSS12Q86WS5 348 aa12.93□□□□□ -0.34
RUNX3-203ENST00000399916 PCSK9Q8NBP7 692 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms