RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 WASH2PQ6VEQ5 465 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 B3GLCTQ6Y288 498 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 ASB18Q6ZVZ8 466 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 RRM2BQ7LG56 351 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 PXKQ7Z7A4 578 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 GLRX5Q86SX6 157 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 VRK2Q86Y07 508 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 GPR135Q8IZ08 494 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 CXorf40AQ8TE69 158 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 COX14Q96I36 57 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 OR7D2Q96RA2 312 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 MYADMQ96S97 322 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 YIPF4Q9BSR8 244 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 CALML5Q9NZT1 146 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 COPZ2Q9P299 210 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 CSNK1G3Q9Y6M4 447 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 BRWD1Q9NSI6 2320 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 PPM1DO15297 605 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 OR1F1O43749 312 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 HYAL3O43820 417 aaPredicted RBP12.41□□□□□ -0.42
TRIM40-207ENST00000396581 OR5F1O95221 314 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 SLC2A10O95528 541 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 PDGFAP04085 211 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 TCRBP04435 133 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 RPN2P04844 631 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 PSMB5P28074 263 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 SHC1P29353 583 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 PRKAG1P54619 331 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 GALEQ14376 348 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 CEBPEQ15744 281 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 ZIC1Q15915 447 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 HNRNPA1L2Q32P51 320 aaKnown RBP12.41□□□□□ -0.42
TRIM40-207ENST00000396581 CDONQ4KMG0 1287 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 CPOQ8IVL8 374 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 CMIPQ8IY22 773 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 BMPERQ8N8U9 685 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 BRIX1Q8TDN6 353 aaKnown RBP12.41□□□□□ -0.42
TRIM40-207ENST00000396581 HAVCR2Q8TDQ0 301 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 KLK6Q92876 244 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 ELSPBP1Q96BH3 223 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 ZG16BQ96DA0 208 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 CNRIP1Q96F85 164 aaPredicted RBP12.41□□□□□ -0.42
TRIM40-207ENST00000396581 C16orf58Q96GQ5 468 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 BBS4Q96RK4 519 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 ALG8Q9BVK2 526 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 PLA2G2FQ9BZM2 168 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 OR51J1Q9H342 316 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 INPP5EQ9NRR6 644 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 NUDT15Q9NV35 164 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 NLGN3Q9NZ94 848 aa12.41□□□□□ -0.42
TRIM40-207ENST00000396581 H2AFY2Q9P0M6 372 aaPredicted RBP12.41□□□□□ -0.42
TRIM40-207ENST00000396581 SPTBN5Q9NRC6 3674 aaKnown RBP12.4□□□□□ -0.42
TRIM40-207ENST00000396581 TCF20Q9UGU0 1960 aaKnown RBP12.4□□□□□ -0.42
TRIM40-207ENST00000396581 A0A1B0GVI7 797 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 RPS10-NUDT3A0A1W2PQS6 291 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 MEN1O00255 615 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 FRS3O43559 492 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 ALPPL2P10696 532 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 PEPDP12955 493 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 GJA4P35212 333 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 SSR2P43308 183 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 METAP1P53582 386 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 DUSP2Q05923 314 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 DLX2Q07687 328 aaPredicted RBP12.4□□□□□ -0.42
TRIM40-207ENST00000396581 CCDC85BQ15834 202 aaPredicted RBP12.4□□□□□ -0.42
TRIM40-207ENST00000396581 C9orf64Q5T6V5 341 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 GPR139Q6DWJ6 353 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 NIPAL3Q6P499 406 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 CXXC5Q7LFL8 322 aaKnown RBP12.4□□□□□ -0.42
TRIM40-207ENST00000396581 GDF7Q7Z4P5 450 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 BMP8AQ7Z5Y6 402 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 CDH24Q86UP0 819 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 NRMQ8IXM6 262 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 ZNF366Q8N895 744 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 SAMD12Q8N8I0 201 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 TEX19Q8NA77 164 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 ADAMTS14Q8WXS8 1223 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 KISS1RQ969F8 398 aaPredicted RBP12.4□□□□□ -0.42
TRIM40-207ENST00000396581 PHF21AQ96BD5 680 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 RADILQ96JH8 1075 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 C7orf50Q9BRJ6 194 aaKnown RBP12.4□□□□□ -0.42
TRIM40-207ENST00000396581 UBQLN3Q9H347 655 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 CES1P1Q9UKY3 287 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 RASD1Q9Y272 281 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 NPTNQ9Y639 398 aa12.4□□□□□ -0.42
TRIM40-207ENST00000396581 MEIKINA0A087WXM9 373 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 IGKV1-8A0A0C4DH67 115 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 KPNA3O00505 521 aaPredicted RBP12.39□□□□□ -0.43
TRIM40-207ENST00000396581 CDC42EP2O14613 210 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 EEF1E1O43324 174 aaKnown RBP12.39□□□□□ -0.43
TRIM40-207ENST00000396581 EMC8O43402 210 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 LZTS3O60299 673 aaPredicted RBP12.39□□□□□ -0.43
TRIM40-207ENST00000396581 PRKRAO75569 313 aaKnown RBP12.39□□□□□ -0.43
TRIM40-207ENST00000396581 ZIC2O95409 532 aaPredicted RBP12.39□□□□□ -0.43
TRIM40-207ENST00000396581 PRNPP04156 253 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 ZGLP1P0C6A0 271 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 SULT1A3P0DMM9 295 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 SULT1A4P0DMN0 295 aa12.39□□□□□ -0.43
TRIM40-207ENST00000396581 POLR2CP19387 275 aaPredicted RBP12.39□□□□□ -0.43
TRIM40-207ENST00000396581 ATP6V1E1P36543 226 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms