RNA–Protein interactions for RNA: ENST00000379013.6

UPK1A-202, Transcript of uroplakin 1A, humanhuman

TSL 1 (best) BASIC

Gene UPK1A, Length 1,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1A-202ENST00000379013 Q6ZS92 163 aa12.72□□□□□ -0.37
UPK1A-202ENST00000379013 PRR22Q8IZ63 422 aa12.72□□□□□ -0.37
UPK1A-202ENST00000379013 ZADH2Q8N4Q0 377 aa12.72□□□□□ -0.37
UPK1A-202ENST00000379013 TMEM178AQ8NBL3 297 aa12.72□□□□□ -0.37
UPK1A-202ENST00000379013 CATSPER1Q8NEC5 780 aa12.72□□□□□ -0.37
UPK1A-202ENST00000379013 WDR60Q8WVS4 1066 aa12.72□□□□□ -0.37
UPK1A-202ENST00000379013 HAS2Q92819 552 aa12.72□□□□□ -0.37
UPK1A-202ENST00000379013 SLC35B4Q969S0 331 aa12.72□□□□□ -0.37
UPK1A-202ENST00000379013 PNPLA2Q96AD5 504 aa12.72□□□□□ -0.37
UPK1A-202ENST00000379013 LIN28AQ9H9Z2 209 aaKnown RBP12.72□□□□□ -0.37
UPK1A-202ENST00000379013 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.72□□□□□ -0.37
UPK1A-202ENST00000379013 SACM1LQ9NTJ5 587 aa12.72□□□□□ -0.37
UPK1A-202ENST00000379013 ASF1BQ9NVP2 202 aa12.72□□□□□ -0.37
UPK1A-202ENST00000379013 KLRF1Q9NZS2 232 aa12.72□□□□□ -0.37
UPK1A-202ENST00000379013 MKLN1Q9UL63 735 aa12.72□□□□□ -0.37
UPK1A-202ENST00000379013 DTNAQ9Y4J8 743 aa12.72□□□□□ -0.37
UPK1A-202ENST00000379013 GPC6Q9Y625 555 aaPredicted RBP12.72□□□□□ -0.37
UPK1A-202ENST00000379013 KCNE3Q9Y6H6 103 aa12.72□□□□□ -0.37
UPK1A-202ENST00000379013 NINQ8N4C6 2090 aa12.72□□□□□ -0.37
UPK1A-202ENST00000379013 ANKRD33BA6NCL7 494 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 PRAMEF25A6NGN4 478 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 AGAP5A6NIR3 686 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 ARPC2O15144 300 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 UGT2B11O75310 529 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 SEMA7AO75326 666 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 NME6O75414 186 aaPredicted RBP12.71□□□□□ -0.37
UPK1A-202ENST00000379013 OR6B1O95007 311 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 SNX4O95219 450 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 C8BP07358 591 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 CYP4B1P13584 511 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 NID1P14543 1247 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 PRKAR1BP31321 381 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 KDELR2P33947 212 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 CHRNEQ04844 493 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 EIF2S3LQ2VIR3 472 aaKnown RBP12.71□□□□□ -0.37
UPK1A-202ENST00000379013 LRRC23Q53EV4 343 aaPredicted RBP12.71□□□□□ -0.37
UPK1A-202ENST00000379013 ZNF311Q5JNZ3 666 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 RNF220Q5VTB9 566 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 C1orf146Q5VVC0 180 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 HIST2H2BCQ6DN03 193 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 LCN8Q6JVE9 175 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 PGM2L1Q6PCE3 622 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 EIF3MQ7L2H7 374 aaKnown RBP12.71□□□□□ -0.37
UPK1A-202ENST00000379013 ZNF440Q8IYI8 595 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 ZNF614Q8N883 585 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 FAM98AQ8NCA5 519 aaKnown RBP12.71□□□□□ -0.37
UPK1A-202ENST00000379013 OR52P1PQ8NH57 321 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 PAQR8Q8TEZ7 354 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 PROX1Q92786 737 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 PSMG3-AS1Q96PY0 264 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 PINK1Q9BXM7 581 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.71□□□□□ -0.37
UPK1A-202ENST00000379013 EGFL7Q9UHF1 273 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 SLC9A8Q9Y2E8 581 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 KLF13Q9Y2Y9 288 aaPredicted RBP12.71□□□□□ -0.37
UPK1A-202ENST00000379013 PCDHGB6Q9Y5F9 930 aa12.71□□□□□ -0.37
UPK1A-202ENST00000379013 TRAV17A0A0B4J275 112 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 ALG1L2C9J202 215 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 SYT5O00445 386 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 NDUFB5O43674 189 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 FCMRO60667 390 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 ICOSLGO75144 302 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 SLC25A12O75746 678 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 OXSR1O95747 527 aaPredicted RBP12.7□□□□□ -0.38
UPK1A-202ENST00000379013 WDPCPO95876 746 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 PABPC4LP0CB38 370 aaKnown RBP12.7□□□□□ -0.38
UPK1A-202ENST00000379013 NQO1P15559 274 aaKnown RBP12.7□□□□□ -0.38
UPK1A-202ENST00000379013 RPS4Y1P22090 263 aaKnown RBP12.7□□□□□ -0.38
UPK1A-202ENST00000379013 AQP1P29972 269 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 ADH7P40394 386 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 FBXW4P57775 412 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 C17orf67Q0P5P2 114 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 TUBA3CQ13748 450 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 OR1C1Q15619 314 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 GRAMD1BQ3KR37 738 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 TUBA3EQ6PEY2 450 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 LYPD8Q6UX82 237 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 PACS2Q86VP3 889 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 C10orf111Q8N326 155 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 GALNT11Q8NCW6 608 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 PSD4Q8NDX1 1056 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 OR5M3Q8NGP4 307 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 HGDQ93099 445 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 BARD1Q99728 777 aaKnown RBP12.7□□□□□ -0.38
UPK1A-202ENST00000379013 OSBPL11Q9BXB4 747 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 UGT2B28Q9BY64 529 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 RUBCNLQ9H714 662 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 OLAHQ9NV23 265 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 PLA2G3Q9NZ20 509 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 SLC7A8Q9UHI5 535 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 POMPQ9Y244 141 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 B3GNT3Q9Y2A9 372 aa12.7□□□□□ -0.38
UPK1A-202ENST00000379013 EML6Q6ZMW3 1958 aa12.69□□□□□ -0.38
UPK1A-202ENST00000379013 AQP12BA6NM10 295 aa12.69□□□□□ -0.38
UPK1A-202ENST00000379013 NPIPB9F8W1W9 429 aa12.69□□□□□ -0.38
UPK1A-202ENST00000379013 KLRC4-KLRK1H3BQV0 150 aa12.69□□□□□ -0.38
UPK1A-202ENST00000379013 M0QX08 132 aa12.69□□□□□ -0.38
UPK1A-202ENST00000379013 GTPBP1O00178 669 aaKnown RBP12.69□□□□□ -0.38
UPK1A-202ENST00000379013 UGT2B17O75795 530 aa12.69□□□□□ -0.38
UPK1A-202ENST00000379013 WISP2O76076 250 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms