RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 TCF7L1Q9HCS4 588 aa12.28□□□□□ -0.44
NCSTN-202ENST00000368063 TMEM161AQ9NX61 479 aa12.28□□□□□ -0.44
NCSTN-202ENST00000368063 CAMK2AQ9UQM7 478 aa12.28□□□□□ -0.44
NCSTN-202ENST00000368063 GREB1Q4ZG55 1949 aa12.28□□□□□ -0.44
NCSTN-202ENST00000368063 PCNTO95613 3336 aa12.28□□□□□ -0.44
NCSTN-202ENST00000368063 CCDC88CQ9P219 2028 aa12.28□□□□□ -0.44
NCSTN-202ENST00000368063 SERTM1A2A2V5 107 aa12.28□□□□□ -0.44
NCSTN-202ENST00000368063 KDM4EB2RXH2 506 aaPredicted RBP12.28□□□□□ -0.44
NCSTN-202ENST00000368063 SLC31A2O15432 143 aa12.28□□□□□ -0.44
NCSTN-202ENST00000368063 IL10RAQ13651 578 aa12.28□□□□□ -0.44
NCSTN-202ENST00000368063 ALKBH1Q13686 389 aaKnown RBP12.28□□□□□ -0.44
NCSTN-202ENST00000368063 CPTPQ5TA50 214 aa12.28□□□□□ -0.44
NCSTN-202ENST00000368063 CAMKMTQ7Z624 323 aa12.28□□□□□ -0.44
NCSTN-202ENST00000368063 C14orf144Q96I85 54 aa12.28□□□□□ -0.44
NCSTN-202ENST00000368063 PLEKHA1Q9HB21 404 aa12.28□□□□□ -0.44
NCSTN-202ENST00000368063 GPN1Q9HCN4 374 aaPredicted RBP12.28□□□□□ -0.44
NCSTN-202ENST00000368063 TMEM248Q9NWD8 314 aa12.28□□□□□ -0.44
NCSTN-202ENST00000368063 GPR52Q9Y2T5 361 aa12.28□□□□□ -0.44
NCSTN-202ENST00000368063 PCDHB9Q9Y5E1 797 aa12.28□□□□□ -0.44
NCSTN-202ENST00000368063 PCDHGA5Q9Y5G8 931 aa12.28□□□□□ -0.44
NCSTN-202ENST00000368063 SIRT4Q9Y6E7 314 aaPredicted RBP12.28□□□□□ -0.44
NCSTN-202ENST00000368063 RFXAPO00287 272 aa12.27□□□□□ -0.44
NCSTN-202ENST00000368063 HPGDP15428 266 aa12.27□□□□□ -0.44
NCSTN-202ENST00000368063 NFYBP25208 207 aa12.27□□□□□ -0.44
NCSTN-202ENST00000368063 BDKRB2P30411 391 aa12.27□□□□□ -0.44
NCSTN-202ENST00000368063 CCL23P55773 120 aa12.27□□□□□ -0.44
NCSTN-202ENST00000368063 TAS2R60P59551 318 aa12.27□□□□□ -0.44
NCSTN-202ENST00000368063 SPCS3P61009 180 aa12.27□□□□□ -0.44
NCSTN-202ENST00000368063 BLOC1S1P78537 153 aa12.27□□□□□ -0.44
NCSTN-202ENST00000368063 ANKRD39Q53RE8 183 aa12.27□□□□□ -0.44
NCSTN-202ENST00000368063 ZNF805Q5CZA5 627 aa12.27□□□□□ -0.44
NCSTN-202ENST00000368063 C9orf131Q5VYM1 1079 aa12.27□□□□□ -0.44
NCSTN-202ENST00000368063 TCTN3Q6NUS6 607 aa12.27□□□□□ -0.44
NCSTN-202ENST00000368063 SSX9Q7RTT3 188 aa12.27□□□□□ -0.44
NCSTN-202ENST00000368063 OR2W3Q7Z3T1 314 aa12.27□□□□□ -0.44
NCSTN-202ENST00000368063 CFAP206Q8IYR0 622 aa12.27□□□□□ -0.44
NCSTN-202ENST00000368063 OR4D9Q8NGE8 314 aa12.27□□□□□ -0.44
NCSTN-202ENST00000368063 OR52B4Q8NGK2 314 aa12.27□□□□□ -0.44
NCSTN-202ENST00000368063 STK35Q8TDR2 534 aa12.27□□□□□ -0.44
NCSTN-202ENST00000368063 GINS4Q9BRT9 223 aa12.27□□□□□ -0.44
NCSTN-202ENST00000368063 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.27□□□□□ -0.44
NCSTN-202ENST00000368063 KLK14Q9P0G3 267 aa12.27□□□□□ -0.44
NCSTN-202ENST00000368063 PATJQ8NI35 1801 aa12.27□□□□□ -0.44
NCSTN-202ENST00000368063 NAP1L6A6NFF2 107 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 ABOP16442 354 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 RHOQP17081 205 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 NDUFB7P17568 137 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 CCINQ13939 588 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 PEA15Q15121 130 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 ZNF630Q2M218 657 aaPredicted RBP12.27□□□□□ -0.45
NCSTN-202ENST00000368063 ANXA8L1Q5VT79 327 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 ZNF322Q6U7Q0 402 aaPredicted RBP12.27□□□□□ -0.45
NCSTN-202ENST00000368063 CD300LDQ6UXZ3 194 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 HMGB4Q8WW32 186 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 RSPO3Q9BXY4 272 aaPredicted RBP12.27□□□□□ -0.45
NCSTN-202ENST00000368063 CIPCQ9C0C6 399 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 WDR13Q9H1Z4 485 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 SLC32A1Q9H598 525 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 BPIFA1Q9NP55 256 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 ATXN7L1Q9ULK2 861 aaPredicted RBP12.27□□□□□ -0.45
NCSTN-202ENST00000368063 PLEKHA6Q9Y2H5 1048 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 CKAP5Q14008 2032 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 C1orf196B1AJZ1 125 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 E9PI62 339 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 F5H5P2 479 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 PRAMEF4O60810 478 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 IGHV2-5P01817 119 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 IGHA1P01876 353 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 H1F0P07305 194 aaKnown RBP12.27□□□□□ -0.45
NCSTN-202ENST00000368063 ARAFP10398 606 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 LPOP22079 712 aaPredicted RBP12.27□□□□□ -0.45
NCSTN-202ENST00000368063 PAX6P26367 422 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 TRHRP34981 398 aaPredicted RBP12.27□□□□□ -0.45
NCSTN-202ENST00000368063 ARHGEF7Q14155 803 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 CSRP2Q16527 193 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 LINC00303Q3SY05 128 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 DCAF12L2Q5VW00 463 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 PRAMEF9Q5VWM5 478 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 C3orf33Q6P1S2 294 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 BAIAP2L2Q6UXY1 529 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 DCUN1D3Q8IWE4 304 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 SLC7A13Q8TCU3 470 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 SPATA33Q96N06 139 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 EDEM2Q9BV94 578 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 RDH14Q9HBH5 336 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 CSNK1G1Q9HCP0 422 aa12.27□□□□□ -0.45
NCSTN-202ENST00000368063 NINQ8N4C6 2090 aa12.26□□□□□ -0.45
NCSTN-202ENST00000368063 SLC25A12O75746 678 aa12.26□□□□□ -0.45
NCSTN-202ENST00000368063 OR8U8P0C7N1 319 aa12.26□□□□□ -0.45
NCSTN-202ENST00000368063 ABCD3P28288 659 aa12.26□□□□□ -0.45
NCSTN-202ENST00000368063 PGFP49763 221 aa12.26□□□□□ -0.45
NCSTN-202ENST00000368063 PPT1P50897 306 aa12.26□□□□□ -0.45
NCSTN-202ENST00000368063 HMGCS2P54868 508 aa12.26□□□□□ -0.45
NCSTN-202ENST00000368063 ZNF235Q14590 738 aa12.26□□□□□ -0.45
NCSTN-202ENST00000368063 ZXDCQ2QGD7 858 aaPredicted RBP12.26□□□□□ -0.45
NCSTN-202ENST00000368063 TMEM44Q2T9K0 475 aa12.26□□□□□ -0.45
NCSTN-202ENST00000368063 CDNFQ49AH0 187 aa12.26□□□□□ -0.45
NCSTN-202ENST00000368063 FRG2Q64ET8 278 aa12.26□□□□□ -0.45
NCSTN-202ENST00000368063 SMAP2Q8WU79 429 aaPredicted RBP12.26□□□□□ -0.45
NCSTN-202ENST00000368063 TRIM43Q96BQ3 446 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms