RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 SEC23BQ15437 767 aa13.22□□□□□ -0.29
SREBF1-202ENST00000355815 NKPD1Q17RQ9 610 aa13.22□□□□□ -0.29
SREBF1-202ENST00000355815 HNRNPA1L2Q32P51 320 aaKnown RBP13.22□□□□□ -0.29
SREBF1-202ENST00000355815 KLHDC8AQ8IYD2 350 aa13.22□□□□□ -0.29
SREBF1-202ENST00000355815 ZNF101Q8IZC7 436 aa13.22□□□□□ -0.29
SREBF1-202ENST00000355815 ZFP82Q8N141 532 aa13.22□□□□□ -0.29
SREBF1-202ENST00000355815 GTPBP8Q8N3Z3 284 aaPredicted RBP13.22□□□□□ -0.29
SREBF1-202ENST00000355815 ADAMTS19Q8TE59 1207 aa13.22□□□□□ -0.29
SREBF1-202ENST00000355815 PCDHGB2Q9Y5G2 931 aa13.22□□□□□ -0.29
SREBF1-202ENST00000355815 TRBV4-1A0A0J9YWV2 114 aa13.22□□□□□ -0.29
SREBF1-202ENST00000355815 FAM171A2A8MVW0 826 aa13.22□□□□□ -0.29
SREBF1-202ENST00000355815 CTSLP07711 333 aa13.22□□□□□ -0.29
SREBF1-202ENST00000355815 DDX6P26196 483 aaKnown RBP eCLIP13.22□□□□□ -0.291e-7■■■■■ 60
SREBF1-202ENST00000355815 EIF1AXP47813 144 aaKnown RBP13.22□□□□□ -0.29
SREBF1-202ENST00000355815 PRKXP51817 358 aa13.22□□□□□ -0.29
SREBF1-202ENST00000355815 CXCR4P61073 352 aa13.22□□□□□ -0.29
SREBF1-202ENST00000355815 ARF3P61204 181 aaPredicted RBP13.22□□□□□ -0.29
SREBF1-202ENST00000355815 ARF1P84077 181 aaKnown RBP13.22□□□□□ -0.29
SREBF1-202ENST00000355815 TAGLNQ01995 201 aaKnown RBP13.22□□□□□ -0.29
SREBF1-202ENST00000355815 ZNF169Q14929 603 aaPredicted RBP13.22□□□□□ -0.29
SREBF1-202ENST00000355815 FIGNL1Q6PIW4 674 aa13.22□□□□□ -0.29
SREBF1-202ENST00000355815 SFTPA1Q8IWL2 248 aa13.22□□□□□ -0.29
SREBF1-202ENST00000355815 SLC44A3Q8N4M1 653 aa13.22□□□□□ -0.29
SREBF1-202ENST00000355815 MFSD8Q8NHS3 518 aa13.22□□□□□ -0.29
SREBF1-202ENST00000355815 DYNC2LI1Q8TCX1 351 aa13.22□□□□□ -0.29
SREBF1-202ENST00000355815 ISG20Q96AZ6 181 aaKnown RBP13.22□□□□□ -0.29
SREBF1-202ENST00000355815 CXorf36Q9H7Y0 433 aa13.22□□□□□ -0.29
SREBF1-202ENST00000355815 C1orf196B1AJZ1 125 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 SLC22A5O76082 557 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 HMGN2P05204 90 aaKnown RBP13.21□□□□□ -0.29
SREBF1-202ENST00000355815 OSMP13725 252 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 PRLHRP49683 370 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 SLC35A2P78381 396 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 GPNMBQ14956 572 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 CLVS2Q5SYC1 327 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 QSOX2Q6ZRP7 698 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 ANKK1Q8NFD2 765 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 OR10H5Q8NGA6 315 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 MSLNLQ96KJ4 702 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 EIF5A2Q9GZV4 153 aaKnown RBP13.21□□□□□ -0.29
SREBF1-202ENST00000355815 RBFOX1Q9NWB1 397 aaKnown RBP13.21□□□□□ -0.29
SREBF1-202ENST00000355815 COLEC10Q9Y6Z7 277 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 STMND1H3BQB6 276 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 PRAMEF4O60810 478 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 B4GALT2O60909 372 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 THEGLP0DJG4 465 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 JUNBP17275 347 aaPredicted RBP13.21□□□□□ -0.29
SREBF1-202ENST00000355815 CERS1P27544 350 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 NFATC4Q14934 902 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 TMEM44Q2T9K0 475 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 PRAMEF9Q5VWM5 478 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 MLIPQ5VWP3 458 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 TMEM215Q68D42 235 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 BPHLQ86WA6 291 aaPredicted RBP13.21□□□□□ -0.29
SREBF1-202ENST00000355815 C12orf40Q86WS4 652 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 GJD3Q8N144 294 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 ZNF436Q9C0F3 470 aaPredicted RBP13.21□□□□□ -0.29
SREBF1-202ENST00000355815 SLC25A18Q9H1K4 315 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 SYT4Q9H2B2 425 aa13.21□□□□□ -0.29
SREBF1-202ENST00000355815 SOBPA7XYQ1 873 aa13.21□□□□□ -0.3
SREBF1-202ENST00000355815 GMDSO60547 372 aa13.21□□□□□ -0.3
SREBF1-202ENST00000355815 GYPBP06028 91 aa13.21□□□□□ -0.3
SREBF1-202ENST00000355815 UCHL1P09936 223 aa13.21□□□□□ -0.3
SREBF1-202ENST00000355815 HOXB2P14652 356 aa13.21□□□□□ -0.3
SREBF1-202ENST00000355815 HSD3B2P26439 372 aa13.21□□□□□ -0.3
SREBF1-202ENST00000355815 BMP8BP34820 402 aa13.21□□□□□ -0.3
SREBF1-202ENST00000355815 CCR6P51684 374 aa13.21□□□□□ -0.3
SREBF1-202ENST00000355815 GPLD1P80108 840 aa13.21□□□□□ -0.3
SREBF1-202ENST00000355815 DEFB110Q30KQ9 67 aa13.21□□□□□ -0.3
SREBF1-202ENST00000355815 CCNJQ5T5M9 372 aa13.21□□□□□ -0.3
SREBF1-202ENST00000355815 BMP8AQ7Z5Y6 402 aa13.21□□□□□ -0.3
SREBF1-202ENST00000355815 ZNF454Q8N9F8 522 aa13.21□□□□□ -0.3
SREBF1-202ENST00000355815 OR5P2Q8WZ92 322 aa13.21□□□□□ -0.3
SREBF1-202ENST00000355815 CNOT9Q92600 299 aaKnown RBP13.21□□□□□ -0.3
SREBF1-202ENST00000355815 TCEAL3Q969E4 200 aa13.21□□□□□ -0.3
SREBF1-202ENST00000355815 C16orf58Q96GQ5 468 aa13.21□□□□□ -0.3
SREBF1-202ENST00000355815 ZNF416Q9BWM5 594 aa13.21□□□□□ -0.3
SREBF1-202ENST00000355815 TMEM168Q9H0V1 697 aa13.21□□□□□ -0.3
SREBF1-202ENST00000355815 ZBP1Q9H171 429 aa13.21□□□□□ -0.3
SREBF1-202ENST00000355815 NEUROD4Q9HD90 331 aa13.21□□□□□ -0.3
SREBF1-202ENST00000355815 WDR45Q9Y484 360 aa13.21□□□□□ -0.3
SREBF1-202ENST00000355815 FAAHO00519 579 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 RBMXL2O75526 392 aaKnown RBP13.2□□□□□ -0.3
SREBF1-202ENST00000355815 ZNF821O75541 412 aaPredicted RBP13.2□□□□□ -0.3
SREBF1-202ENST00000355815 KRT33AO76009 404 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 GPX2P18283 190 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 VEZF1Q14119 521 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 GAS6Q14393 721 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 TRAM2Q15035 370 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 VN1R2Q8NFZ6 395 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 C2CD4CQ8TF44 421 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 SMARCD2Q92925 531 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 RCE1Q9Y256 329 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 GRK6P43250 576 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 KIAA0040Q15053 153 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 EIF4HQ15056 248 aaKnown RBP13.2□□□□□ -0.3
SREBF1-202ENST00000355815 TOMM20Q15388 145 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 CST6Q15828 149 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 C6orf132Q5T0Z8 1188 aa13.2□□□□□ -0.3
SREBF1-202ENST00000355815 PYHIN1Q6K0P9 492 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms