RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 CNOT9Q92600 299 aaKnown RBP9.01□□□□□ -0.97
PTPRA-202ENST00000318266 WBP1Q96G27 269 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 ELAC1Q9H777 363 aaKnown RBP9.01□□□□□ -0.97
PTPRA-202ENST00000318266 SLC5A10A0PJK1 596 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 MFSD2BA6NFX1 497 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 GYPBP06028 91 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 ATF1P18846 271 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 PSMB5P28074 263 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 HLA-FP30511 346 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 GDNFP39905 211 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 RAD52P43351 418 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 CLDN2P57739 230 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 UBE2MP61081 183 aaKnown RBP9.01□□□□□ -0.97
PTPRA-202ENST00000318266 ERVK-21P61565 698 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 TSPAN31Q12999 210 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 ZNF311Q5JNZ3 666 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 ZNF697Q5TEC3 545 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 FAM198BQ6UWH4 519 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 CD300LDQ6UXZ3 194 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 GET4Q7L5D6 327 aaPredicted RBP9.01□□□□□ -0.97
PTPRA-202ENST00000318266 ADCK2Q7Z695 626 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 DNAJB7Q7Z6W7 309 aaPredicted RBP9.01□□□□□ -0.97
PTPRA-202ENST00000318266 CPXM2Q8N436 756 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 LSM14AQ8ND56 463 aaKnown RBP9.01□□□□□ -0.97
PTPRA-202ENST00000318266 OR52N1Q8NH53 320 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 PIGXQ8TBF5 258 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 GNPDA2Q8TDQ7 276 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 AUTS2Q8WXX7 1259 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 RNF208Q9H0X6 261 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 WDR26Q9H7D7 661 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 NEUROD4Q9HD90 331 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 PTTG3PQ9NZH4 202 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 CXXC1Q9P0U4 656 aaPredicted RBP9.01□□□□□ -0.97
PTPRA-202ENST00000318266 TAC3Q9UHF0 121 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 AK6Q9Y3D8 172 aaKnown RBP9.01□□□□□ -0.97
PTPRA-202ENST00000318266 YIPF1Q9Y548 306 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 SCN10AQ9Y5Y9 1956 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 DNAH14Q0VDD8 3507 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 PLXNB3Q9ULL4 1909 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 LTBP2Q14767 1821 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 LRRN3E7EW58 273 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 CDC42EP2O14613 210 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 PDCD5O14737 125 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 PEX14O75381 377 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 GALTP07902 379 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 NMBP08949 121 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 CLUP10909 449 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 ANXA7P20073 488 aaKnown RBP9.01□□□□□ -0.97
PTPRA-202ENST00000318266 PYCR1P32322 319 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 NCBP2P52298 156 aaKnown RBP eCLIP9.01□□□□□ -0.97
PTPRA-202ENST00000318266 PGGHGQ32M88 737 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 NHLRC3Q5JS37 347 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 NDUFAF5Q5TEU4 345 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 BTN2A1Q7KYR7 527 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 OR56B4Q8NH76 319 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 ABHD4Q8TB40 342 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 C4orf36Q96KX1 117 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 SARGQ9BW04 601 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 SHARPINQ9H0F6 387 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 OR2AG1Q9H205 316 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 LRRN3Q9H3W5 708 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 CCDC86Q9H6F5 360 aaKnown RBP9.01□□□□□ -0.97
PTPRA-202ENST00000318266 TRIM36Q9NQ86 728 aa9.01□□□□□ -0.97
PTPRA-202ENST00000318266 FXYD6-FXYD2A0A087WZ82 144 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 HMGN2P05204 90 aaKnown RBP9□□□□□ -0.97
PTPRA-202ENST00000318266 RAB3BP20337 219 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 HTR1FP30939 366 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 RPL35P42766 123 aaKnown RBP9□□□□□ -0.97
PTPRA-202ENST00000318266 CCR8P51685 355 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 HCCSP53701 268 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 OR12D2P58182 307 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 DEFA5Q01523 94 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 HTR4Q13639 388 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 ACSM3Q53FZ2 586 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 DGLUCYQ7Z3D6 616 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 FGD2Q7Z6J4 655 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 TMEM150AQ86TG1 271 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 MEIOBQ8N635 442 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 BOLLQ8N9W6 283 aaKnown RBP9□□□□□ -0.97
PTPRA-202ENST00000318266 CYB561A3Q8NBI2 242 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 SOCS4Q8WXH5 440 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 ENKD1Q9H0I2 346 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 FXYD6Q9H0Q3 95 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 GLIPR2Q9H4G4 154 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 ZNF334Q9HCZ1 680 aaPredicted RBP9□□□□□ -0.97
PTPRA-202ENST00000318266 CPNE7Q9UBL6 633 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 PFDN2Q9UHV9 154 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 LRFN2Q9ULH4 789 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 ICKQ9UPZ9 632 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 ASF1AQ9Y294 204 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 STON1Q9Y6Q2 735 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 KIAA1671Q9BY89 1806 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 A0A0G2JK05 382 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 ANXA2P2A6NMY6 339 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 H7BY64 318 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 INPPL1O15357 1258 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 GREM1O60565 184 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 CBX7O95931 251 aa9□□□□□ -0.97
PTPRA-202ENST00000318266 TBX6O95947 436 aaPredicted RBP9□□□□□ -0.97
PTPRA-202ENST00000318266 IGHA1P01876 353 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms