RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 SLC25A13Q9UJS0 675 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 DNMT3AQ9Y6K1 912 aaPredicted RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 A0A0D9SG52 128 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 SHC1P29353 583 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 PYCR1P32322 319 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 NRG3P56975 720 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 MADCAM1Q13477 382 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 KCNA10Q16322 511 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 SERPINA13PQ6UXR4 307 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 GSG1LQ6UXU4 331 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 RANBP3LQ86VV4 465 aaPredicted RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 RNF175Q8N4F7 328 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 OR52H1Q8NGJ2 320 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 LINC00052Q96N35 136 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 CD180Q99467 661 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 PIGMQ9H3S5 423 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 DPEP2Q9H4A9 486 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 COQ3Q9NZJ6 369 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 LRFN2Q9ULH4 789 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 PLCL2Q9UPR0 1127 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 FER1L6Q2WGJ9 1857 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 SURF4O15260 269 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 HYAL3O43820 417 aaPredicted RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 TOXO94900 526 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 ALDOBP05062 364 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 HOXB3P14651 431 aaPredicted RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 GKP32189 559 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 AKR1D1P51857 326 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 RAB8AP61006 207 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 ERVK-21P61565 698 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 HTR4Q13639 388 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 SYPL1Q16563 259 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 NDUFAF6Q330K2 333 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 TMEM35AQ53FP2 167 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 LIPIQ6XZB0 460 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 MBOAT2Q6ZWT7 520 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 RAB11FIP2Q7L804 512 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 RBM45Q8IUH3 476 aaKnown RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 OR10H4Q8NGA5 316 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 OR6K3Q8NGY3 331 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 NSMAFQ92636 917 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 EXOSC8Q96B26 276 aaKnown RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 PHYHIPLQ96FC7 376 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 ARHGDIGQ99819 225 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 WASH6PQ9NQA3 447 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 UPB1Q9UBR1 384 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 GPN3Q9UHW5 284 aaPredicted RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 ING1Q9UK53 422 aaPredicted RBP4.47□□□□□ -1.69
PTPN13-201ENST00000316707 GPR52Q9Y2T5 361 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 PLXNA1Q9UIW2 1896 aa4.47□□□□□ -1.69
PTPN13-201ENST00000316707 TBC1D3EA0A087X179 549 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 OR2M5A3KFT3 312 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 WASH3PC4AMC7 463 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 ARPC1BO15143 372 aaKnown RBP4.46□□□□□ -1.69
PTPN13-201ENST00000316707 SEMA7AO75326 666 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 OLFM2O95897 454 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 CFDP00746 253 aaPredicted RBP4.46□□□□□ -1.69
PTPN13-201ENST00000316707 S100A9P06702 114 aaKnown RBP4.46□□□□□ -1.69
PTPN13-201ENST00000316707 UBBP0CG47 229 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 UBCP0CG48 685 aaKnown RBP4.46□□□□□ -1.69
PTPN13-201ENST00000316707 IRF1P10914 325 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 HMGA1P17096 107 aaKnown RBP4.46□□□□□ -1.69
PTPN13-201ENST00000316707 MECP2P51608 486 aaKnown RBP4.46□□□□□ -1.69
PTPN13-201ENST00000316707 PSMD4P55036 377 aaKnown RBP4.46□□□□□ -1.69
PTPN13-201ENST00000316707 RPS26P62854 115 aaKnown RBP4.46□□□□□ -1.69
PTPN13-201ENST00000316707 RPS27AP62979 156 aaKnown RBP4.46□□□□□ -1.69
PTPN13-201ENST00000316707 UBA52P62987 128 aaKnown RBP4.46□□□□□ -1.69
PTPN13-201ENST00000316707 DGCR2P98153 550 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 STX4Q12846 297 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 HSPB3Q12988 150 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 PTPRRQ15256 657 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 NIPAL3Q6P499 406 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 LRRN1Q6UXK5 716 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 WDR48Q8TAF3 677 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 SCAMP4Q969E2 229 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 MS4A4AQ96JQ5 239 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 RIOK2Q9BVS4 552 aaKnown RBP4.46□□□□□ -1.69
PTPN13-201ENST00000316707 GSDMCQ9BYG8 508 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 SLC19A3Q9BZV2 496 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 MFFQ9GZY8 342 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF304Q9HCX3 659 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 HINT3Q9NQE9 182 aaKnown RBP4.46□□□□□ -1.69
PTPN13-201ENST00000316707 YIPF1Q9Y548 306 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 NUP205Q92621 2012 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 SLC22A23A1A5C7 686 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 UNC119BA6NIH7 251 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 BNIP3LO60238 219 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 HPXP02790 462 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 HIST1H2ABP04908 130 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 UCHL1P09936 223 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 OR12D1P0DN82 309 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 ICAM2P13598 275 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 GNSP15586 552 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 OR1D2P34982 312 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 THBS2P35442 1172 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 PCBP4P57723 403 aaKnown RBP4.46□□□□□ -1.69
PTPN13-201ENST00000316707 SSBP1Q04837 148 aaKnown RBP4.46□□□□□ -1.69
PTPN13-201ENST00000316707 RPS26P11Q5JNZ5 115 aaPredicted RBP4.46□□□□□ -1.69
PTPN13-201ENST00000316707 CLEC12AQ5QGZ9 265 aa4.46□□□□□ -1.69
PTPN13-201ENST00000316707 PRPF38BQ5VTL8 546 aaKnown RBP4.46□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms