RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 SDHDO14521 159 aa23.85■■□□□ 1.41
CDKN2A-201ENST00000304494 ANKRD28O15084 1053 aa23.85■■□□□ 1.41
CDKN2A-201ENST00000304494 SEC14L5O43304 696 aa23.85■■□□□ 1.41
CDKN2A-201ENST00000304494 TNFRSF21O75509 655 aa23.85■■□□□ 1.41
CDKN2A-201ENST00000304494 MATN1P21941 496 aa23.85■■□□□ 1.41
CDKN2A-201ENST00000304494 KRTAP10-9P60411 292 aa23.85■■□□□ 1.41
CDKN2A-201ENST00000304494 RPS3AP61247 264 aaKnown RBP23.85■■□□□ 1.41
CDKN2A-201ENST00000304494 OCRLQ01968 901 aa23.85■■□□□ 1.41
CDKN2A-201ENST00000304494 FLYWCH1Q4VC44 716 aa23.85■■□□□ 1.41
CDKN2A-201ENST00000304494 PLXDC2Q6UX71 529 aa23.85■■□□□ 1.41
CDKN2A-201ENST00000304494 C6orf120Q7Z4R8 191 aa23.85■■□□□ 1.41
CDKN2A-201ENST00000304494 KIF18BQ86Y91 864 aa23.85■■□□□ 1.41
CDKN2A-201ENST00000304494 B4GALNT2Q8NHY0 566 aa23.85■■□□□ 1.41
CDKN2A-201ENST00000304494 PIGMQ9H3S5 423 aa23.85■■□□□ 1.41
CDKN2A-201ENST00000304494 MED12Q93074 2177 aa23.85■■□□□ 1.41
CDKN2A-201ENST00000304494 MYO9AB2RTY4 2548 aa23.84■■□□□ 1.41
CDKN2A-201ENST00000304494 C7orf72A4D263 438 aa23.84■■□□□ 1.41
CDKN2A-201ENST00000304494 E9PBE3 544 aa23.84■■□□□ 1.41
CDKN2A-201ENST00000304494 TGM6O95932 706 aa23.84■■□□□ 1.41
CDKN2A-201ENST00000304494 AK1P00568 194 aa23.84■■□□□ 1.41
CDKN2A-201ENST00000304494 CRHP06850 196 aa23.84■■□□□ 1.41
CDKN2A-201ENST00000304494 SUCLG1P53597 346 aaKnown RBP23.84■■□□□ 1.41
CDKN2A-201ENST00000304494 CLDN15P56746 228 aa23.84■■□□□ 1.41
CDKN2A-201ENST00000304494 CD226Q15762 336 aa23.84■■□□□ 1.41
CDKN2A-201ENST00000304494 KLHL26Q53HC5 615 aa23.84■■□□□ 1.41
CDKN2A-201ENST00000304494 GCNT2Q8N0V5 402 aa23.84■■□□□ 1.41
CDKN2A-201ENST00000304494 GTPBP8Q8N3Z3 284 aaPredicted RBP23.84■■□□□ 1.41
CDKN2A-201ENST00000304494 OR5D16Q8NGK9 328 aa23.84■■□□□ 1.41
CDKN2A-201ENST00000304494 SMPDL3BQ92485 455 aa23.84■■□□□ 1.41
CDKN2A-201ENST00000304494 SH3YL1Q96HL8 342 aaPredicted RBP23.84■■□□□ 1.41
CDKN2A-201ENST00000304494 SLC35G5Q96KT7 338 aa23.84■■□□□ 1.41
CDKN2A-201ENST00000304494 AIG1Q9NVV5 245 aa23.84■■□□□ 1.41
CDKN2A-201ENST00000304494 MARCOQ9UEW3 520 aaPredicted RBP23.84■■□□□ 1.41
CDKN2A-201ENST00000304494 KCNE3Q9Y6H6 103 aa23.84■■□□□ 1.41
CDKN2A-201ENST00000304494 TACC2O95359 2948 aa23.84■■□□□ 1.41
CDKN2A-201ENST00000304494 CREBBPQ92793 2442 aa23.83■■□□□ 1.41
CDKN2A-201ENST00000304494 SCN2BO60939 215 aa23.83■■□□□ 1.41
CDKN2A-201ENST00000304494 KITP10721 976 aa23.83■■□□□ 1.41
CDKN2A-201ENST00000304494 S100A3P33764 101 aa23.83■■□□□ 1.41
CDKN2A-201ENST00000304494 ATP12AP54707 1039 aa23.83■■□□□ 1.41
CDKN2A-201ENST00000304494 CLDN20P56880 219 aa23.83■■□□□ 1.41
CDKN2A-201ENST00000304494 SORDQ00796 357 aa23.83■■□□□ 1.41
CDKN2A-201ENST00000304494 PLPPR5Q32ZL2 321 aa23.83■■□□□ 1.41
CDKN2A-201ENST00000304494 SPANXN4Q5MJ08 99 aa23.83■■□□□ 1.41
CDKN2A-201ENST00000304494 TMEM200AQ86VY9 491 aa23.83■■□□□ 1.41
CDKN2A-201ENST00000304494 ANKRD46Q86W74 232 aa23.83■■□□□ 1.41
CDKN2A-201ENST00000304494 WDR75Q8IWA0 830 aaKnown RBP23.83■■□□□ 1.41
CDKN2A-201ENST00000304494 PHOSPHO1Q8TCT1 267 aa23.83■■□□□ 1.41
CDKN2A-201ENST00000304494 PINK1Q9BXM7 581 aa23.83■■□□□ 1.41
CDKN2A-201ENST00000304494 MED17Q9NVC6 651 aa23.83■■□□□ 1.41
CDKN2A-201ENST00000304494 ZNF175Q9Y473 711 aa23.83■■□□□ 1.41
CDKN2A-201ENST00000304494 DOCK7Q96N67 2140 aa23.83■■□□□ 1.4
CDKN2A-201ENST00000304494 PDZD2O15018 2839 aa23.83■■□□□ 1.4
CDKN2A-201ENST00000304494 SHISA8B8ZZ34 492 aa23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 H0YC42 278 aa23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 CPSF4O95639 269 aaKnown RBP23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 AGR2O95994 175 aa23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 ALDOCP09972 364 aaKnown RBP23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 UQCRC2P22695 453 aa23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 EPHA3P29320 983 aa23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 TPD52P55327 224 aaPredicted RBP23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 RPS26P62854 115 aaKnown RBP23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 FAM174BQ3ZCQ3 159 aa23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 AGBL2Q5U5Z8 902 aa23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 ZZZ3Q8IYH5 903 aa23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 CLEC4FQ8N1N0 589 aa23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 METTL25Q8N6Q8 603 aa23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 CHDHQ8NE62 594 aaPredicted RBP23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 MIPOL1Q8TD10 442 aa23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 FAM222BQ8WU58 562 aa23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 SDF2Q99470 211 aa23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 WDR55Q9H6Y2 383 aaPredicted RBP23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 EXD2Q9NVH0 621 aa23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 CRIM1Q9NZV1 1036 aa23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 PACSIN3Q9UKS6 424 aa23.82■■□□□ 1.4
CDKN2A-201ENST00000304494 KLF11O14901 512 aa23.81■■□□□ 1.4
CDKN2A-201ENST00000304494 CPA2P48052 419 aa23.81■■□□□ 1.4
CDKN2A-201ENST00000304494 SUMO3P55854 103 aaPredicted RBP23.81■■□□□ 1.4
CDKN2A-201ENST00000304494 PHC1P78364 1004 aa23.81■■□□□ 1.4
CDKN2A-201ENST00000304494 SNTB1Q13884 538 aaKnown RBP23.81■■□□□ 1.4
CDKN2A-201ENST00000304494 SGCBQ16585 318 aa23.81■■□□□ 1.4
CDKN2A-201ENST00000304494 ZBTB18Q99592 522 aa23.81■■□□□ 1.4
CDKN2A-201ENST00000304494 RBM24Q9BX46 236 aaKnown RBP23.81■■□□□ 1.4
CDKN2A-201ENST00000304494 SERHL2Q9H4I8 314 aa23.81■■□□□ 1.4
CDKN2A-201ENST00000304494 PAQR5Q9NXK6 330 aaPredicted RBP23.81■■□□□ 1.4
CDKN2A-201ENST00000304494 BTNL2Q9UIR0 455 aa23.81■■□□□ 1.4
CDKN2A-201ENST00000304494 DTNAQ9Y4J8 743 aa23.81■■□□□ 1.4
CDKN2A-201ENST00000304494 TNFSF12-TNFSF13A0A0A6YY99 330 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 NPIPA5A0A0B4J1W7 369 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 GOLGA8QA0A0J9YX86 632 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 A0A1W2PNV4 684 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 GOLGA8OA6NCC3 632 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 NPIPA7E9PJI5 369 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 NPIPB9F8W1W9 429 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 GOLGA8NF8WBI6 632 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 TNFSF13O75888 250 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 NPIPA8P0DM63 369 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 FCGR2AP12318 317 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 ME2P23368 584 aa23.8■■□□□ 1.4
CDKN2A-201ENST00000304494 EIF1P41567 113 aaKnown RBP23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms