RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 FOXRED1Q96CU9 486 aaPredicted RBP13.01□□□□□ -0.33
HCFC2-201ENST00000229330 ZMYND19Q96E35 227 aaPredicted RBP13.01□□□□□ -0.33
HCFC2-201ENST00000229330 CREBZFQ9NS37 354 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 MN1Q10571 1320 aaPredicted RBP13.01□□□□□ -0.33
HCFC2-201ENST00000229330 A0A0A6YYH2 397 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 TCRBV5S2A0A599 114 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 A6NJ64 397 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 ZNF726A6NNF4 738 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 AKR7A2O43488 359 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 KCNK5O95279 499 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 ERVK-21P61565 698 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 OR51L1Q8NGJ5 315 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 ZNF461Q8TAF7 563 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 ZNF559Q9BR84 538 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 MTHFD2LQ9H903 347 aaPredicted RBP13.01□□□□□ -0.33
HCFC2-201ENST00000229330 NDRG4Q9ULP0 352 aaKnown RBP13.01□□□□□ -0.33
HCFC2-201ENST00000229330 CA5BQ9Y2D0 317 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 HIF3AQ9Y2N7 669 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 SLC33A1O00400 549 aaPredicted RBP13.01□□□□□ -0.33
HCFC2-201ENST00000229330 PHYHO14832 338 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 SYPP08247 313 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 FOSL1P15407 271 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 SLC1A3P43003 542 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 CTF1Q16619 201 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 OR4C11Q6IEV9 310 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 FAM122BQ7Z309 247 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 CCDC54Q8NEL0 328 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 ZNF417Q8TAU3 575 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 SLC22A8Q8TCC7 542 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 KLK6Q92876 244 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 MSLNLQ96KJ4 702 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 MICU1Q9BPX6 476 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 TUBB1Q9H4B7 451 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 ZNF304Q9HCX3 659 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 SLC7A7Q9UM01 511 aa13.01□□□□□ -0.33
HCFC2-201ENST00000229330 TP53P04637 393 aaPredicted RBP13□□□□□ -0.33
HCFC2-201ENST00000229330 RAB40ALP0C0E4 278 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 VITQ6UXI7 678 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 DLEU7Q6UYE1 221 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 MEPCEQ7L2J0 689 aaKnown RBP13□□□□□ -0.33
HCFC2-201ENST00000229330 RAB40AQ8WXH6 277 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 MYLIPQ8WY64 445 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 PDLIM5Q96HC4 596 aaKnown RBP13□□□□□ -0.33
HCFC2-201ENST00000229330 HIST1H2AAQ96QV6 131 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 ZIC5Q96T25 663 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 NIPSNAP1Q9BPW8 284 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 MYO18AQ92614 2054 aaKnown RBP13□□□□□ -0.33
HCFC2-201ENST00000229330 MEIS3P1A6NDR6 274 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 SSX4O60224 188 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 AHSA1O95433 338 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 CDK2P24941 298 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 CHATP28329 748 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 BDKRB2P30411 391 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 CCKBRP32239 447 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 VEGFCP49767 419 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 ILKQ13418 452 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 RBMS2Q15434 407 aaKnown RBP13□□□□□ -0.33
HCFC2-201ENST00000229330 PXYLP1Q8TE99 480 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 TM9SF4Q92544 642 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 IL17FQ96PD4 163 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 CDC6Q99741 560 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 DNAJC25-GNG10A0A024R161 153 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 RHPN2P1A8MT19 583 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 TMEM150CB9EJG8 249 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 STMND1H3BQB6 276 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 OR7A17O14581 309 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 COCHO43405 550 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 SLC16A8O95907 504 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 SNRPBP14678 240 aaKnown RBP13□□□□□ -0.33
HCFC2-201ENST00000229330 HOXA11P31270 313 aaPredicted RBP13□□□□□ -0.33
HCFC2-201ENST00000229330 ETV6P41212 452 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 RIDAP52758 137 aaKnown RBP13□□□□□ -0.33
HCFC2-201ENST00000229330 PGGHGQ32M88 737 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 MLIPQ5VWP3 458 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 B3GLCTQ6Y288 498 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 LRRC25Q8N386 305 aaPredicted RBP13□□□□□ -0.33
HCFC2-201ENST00000229330 RADILQ96JH8 1075 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 SFXN2Q96NB2 322 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 TRDV1A0A1B0GX56 115 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 RPS10-NUDT3A0A1W2PQS6 291 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 MYADML2A6NDP7 307 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 GAPDHSO14556 408 aaPredicted RBP13□□□□□ -0.33
HCFC2-201ENST00000229330 GJB5O95377 273 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 SLC34A2O95436 690 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 ASGR2P07307 311 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 H2BFMP0C1H6 154 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 GP1BBP13224 206 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 RPS10P46783 165 aaKnown RBP13□□□□□ -0.33
HCFC2-201ENST00000229330 CCR6P51684 374 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 PAN3Q58A45 887 aaKnown RBP13□□□□□ -0.33
HCFC2-201ENST00000229330 SFXN4Q6P4A7 337 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 GLB1L2Q8IW92 636 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 NLGN4XQ8N0W4 816 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 ZNF680Q8NEM1 530 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 ZNF582Q96NG8 517 aaPredicted RBP13□□□□□ -0.33
HCFC2-201ENST00000229330 GPR78Q96P69 363 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 ALOXE3Q9BYJ1 711 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 PARPBPQ9NWS1 579 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 CLEC2DQ9UHP7 191 aa13□□□□□ -0.33
HCFC2-201ENST00000229330 SMCO3A2RU48 225 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms