RNA–Protein interactions for RNA: ENST00000219334.9

SMPD3-201, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD3, Length 5,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-201ENST00000219334 FRS3O43559 492 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 SNNO75324 88 aaPredicted RBP17.81■□□□□ 0.44
SMPD3-201ENST00000219334 MRPL33O75394 65 aaKnown RBP17.81■□□□□ 0.44
SMPD3-201ENST00000219334 PTHP01270 115 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 TMEM31Q5JXX7 168 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 CENPSQ8N2Z9 138 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 ARMC1Q9NVT9 282 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 CRTAPO75718 401 aaPredicted RBP17.81■□□□□ 0.44
SMPD3-201ENST00000219334 OPN1LWP04000 364 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 MAP4K2Q12851 820 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 ERV3-1Q14264 604 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 ARRDC2Q8TBH0 407 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 OR6C1Q96RD1 312 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 SLC6A16Q9GZN6 736 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 ARNT2Q9HBZ2 717 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 OBP2AQ9NY56 170 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 GHRLQ9UBU3 117 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 CHMP24386 653 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 DTX3Q8N9I9 347 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 TREX2Q9BQ50 279 aaPredicted RBP17.81■□□□□ 0.44
SMPD3-201ENST00000219334 TREX1Q9NSU2 369 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 GPR83Q9NYM4 423 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 F11P03951 625 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 ZP2Q05996 745 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 GK3PQ14409 553 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 CPZQ66K79 652 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 WBP2NLQ6ICG8 309 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 MFSD9Q8NBP5 474 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 RAB39BQ96DA2 213 aa17.81■□□□□ 0.44
SMPD3-201ENST00000219334 EDN1P05305 212 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 IVDP26440 423 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 PHC1P78364 1004 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 UBE2UQ5VVX9 321 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 CSNK2A3Q8NEV1 391 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 LIN28AQ9H9Z2 209 aaKnown RBP17.8■□□□□ 0.44
SMPD3-201ENST00000219334 CUEDC1Q9NWM3 386 aaPredicted RBP17.8■□□□□ 0.44
SMPD3-201ENST00000219334 ADAMTS6Q9UKP5 1117 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 POLHQ9Y253 713 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 C12orf71A8MTZ7 269 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 F5H0A9 414 aaPredicted RBP17.8■□□□□ 0.44
SMPD3-201ENST00000219334 SERPINA5P05154 406 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 UGT2B7P16662 529 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 CAPN3P20807 821 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 KIAA0907Q7Z7F0 614 aaPredicted RBP17.8■□□□□ 0.44
SMPD3-201ENST00000219334 GPR149Q86SP6 731 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 CCDC71LQ8N9Z2 235 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 ASB12Q8WXK4 309 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 MYADMQ96S97 322 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 ACPTQ9BZG2 426 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 CHRM4P08173 479 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 CPOXP36551 454 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 LSSP48449 732 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 PTPRRQ15256 657 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 CMTM1Q8IZ96 169 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 GPR148Q8TDV2 347 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 TRUB1Q8WWH5 349 aaKnown RBP17.8■□□□□ 0.44
SMPD3-201ENST00000219334 LGALS12Q96DT0 336 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 SLC39A13Q96H72 371 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 PHOX2BQ99453 314 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 TWSG1Q9GZX9 223 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 OR2S2Q9NQN1 319 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 CCL26Q9Y258 94 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 SLC6A5Q9Y345 797 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 MAGED1Q9Y5V3 778 aaPredicted RBP17.8■□□□□ 0.44
SMPD3-201ENST00000219334 AKR1C4P17516 323 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 RAB3AP20336 220 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 MAP2K3P46734 347 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 RACK1P63244 317 aaKnown RBP17.8■□□□□ 0.44
SMPD3-201ENST00000219334 OR5M10Q6IEU7 315 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 GAREM2Q75VX8 874 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 AMDHD1Q96NU7 426 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 INTS14Q96SY0 518 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 ULBP2Q9BZM5 246 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 B3GNT3Q9Y2A9 372 aa17.8■□□□□ 0.44
SMPD3-201ENST00000219334 GABRR3A8MPY1 467 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 MPIG6BO95866 241 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 RAB38P57729 211 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 PRR18Q8N4B5 295 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 ZIC5Q96T25 663 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 ABCG5Q9H222 651 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 HSPB11Q9Y547 144 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 NME4O00746 187 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 SSR4P51571 173 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 MBTPS1Q14703 1052 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 PAPD5Q8NDF8 572 aaKnown RBP17.79■□□□□ 0.44
SMPD3-201ENST00000219334 CDC6Q99741 560 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 THAP10Q9P2Z0 257 aaPredicted RBP17.79■□□□□ 0.44
SMPD3-201ENST00000219334 NUDT21O43809 227 aaKnown RBP17.79■□□□□ 0.44
SMPD3-201ENST00000219334 CACNG3O60359 315 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 RP2O75695 350 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 IFNA1P01562 189 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 IGHG1P01857 330 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 H2AFB2P0C5Z0 115 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 ERP29P30040 261 aaKnown RBP17.79■□□□□ 0.44
SMPD3-201ENST00000219334 SLC5A2P31639 672 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 ERVK-25P63136 954 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 CNN3Q15417 329 aaKnown RBP17.79■□□□□ 0.44
SMPD3-201ENST00000219334 BORAQ6PGQ7 559 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 ADIPOR2Q86V24 386 aa17.79■□□□□ 0.44
SMPD3-201ENST00000219334 ISOC1Q96CN7 298 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms