RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 B3gntl1Q3U129 357 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Amz2Q400C8 359 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Phox2aQ62066 280 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Kcnip4Q6PHZ8 250 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Cpne5Q8JZW4 593 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Etfrf1Q91V16 86 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 HadhbQ99JY0 475 aaKnown RBP11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 HrgQ9ESB3 525 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gm17535J3KMR8 224 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Tmem200cJ3QK46 637 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 MstnO08689 376 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Il10P18893 178 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 AcrP23578 436 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gipc3Q8R5M0 297 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr307Q8VFN8 313 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Ndufa9Q9DC69 377 aaKnown RBP11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Nwd2Q6P5U7 1742 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr724K7N5X7 309 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Adra2bP30545 450 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Spire1Q52KF3 598 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr1197Q7TR13 314 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 P4htmQ8BG58 503 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gpc2Q8BKV1 579 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Sfxn5Q925N0 342 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Syt5Q9R0N5 386 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Kcnj16Q9Z307 419 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Tm9sf2P58021 662 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gxylt1Q3UHH8 404 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 H2-Eb2Q3UUV9 287 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 CalcrQ60755 533 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Chst9Q76EC5 413 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Paqr7Q80ZE4 345 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Fam163bQ8BUM6 167 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 SptssaQ8R207 71 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Rab7bQ8VEA8 199 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr283Q8VGU2 309 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Park7Q99LX0 189 aaKnown RBP11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Raver1Q9CW46 748 aaKnown RBP11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Phf6Q9D4J7 364 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Padi1Q9Z185 662 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Slc37a4A0A1L1SUI3 450 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr1303A2AVW1 312 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 FxnO35943 207 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Sox3P53784 375 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Tm6sf2Q8R1J1 378 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr116Q923Q6 321 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr576A0A0G2JFH3 312 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Mpeg1A1L314 713 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Obp1bA2AEP0 171 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gm14743A2BHD2 171 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gm6096D3YTY6 151 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Siah1aP61092 282 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Isg20l2Q3U1G5 368 aaKnown RBP11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Il10raQ61727 575 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Azgp1Q64726 307 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Ankrd33Q8BXP5 385 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Creb5Q8K1L0 357 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Kctd11Q8K485 232 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Onecut3Q8K557 490 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Tor2aQ8R1J9 321 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 TapbplQ8VD31 451 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 C1qtnf2Q9D8U4 294 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Rfc2Q9WUK4 349 aaKnown RBP11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Cytl1A1E5L0 139 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr31E9Q3K2 317 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Vmn2r9K7N6Z8 848 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 En1P09065 401 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 SgcaP82350 387 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Nfatc3P97305 1075 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Vmn2r81Q80Z09 865 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Fbxw13Q8BI57 466 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Bri3bpQ8BXV2 253 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Fn3krpQ8K274 309 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Plekhh3Q8VCE9 796 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 PirQ9D711 290 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Asf1bQ9DAP7 202 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 EmcnQ9R0H2 261 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Hey1Q9WV93 299 aa11.34□□□□□ -0.59
Trim56-201ENSMUST00000054384 Arid1aA2BH40 2283 aaKnown RBP11.33□□□□□ -0.59
Trim56-201ENSMUST00000054384 Dcaf4A0A1Y7VNZ0 532 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Efna3O08545 230 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Chek1O35280 476 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 InhaQ04997 366 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Rph3alQ768S4 302 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Vmn1r231Q8R2A3 311 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Ccdc86Q9JJ89 426 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Slc23a1Q9Z2J0 605 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Atf6bO35451 699 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Tyrp1P07147 537 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Hoxd13P70217 339 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 BmxP97504 651 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gfod1Q3UHD2 390 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Dyrk2Q5U4C9 599 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Gpr22Q8BZL4 432 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Vmn1r22Q8R2D1 302 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 FuomQ8R2K1 153 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 MallQ91X49 154 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Fam174aQ9D3L0 190 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Med1Q925J9 1575 aa11.33□□□□□ -0.6
Trim56-201ENSMUST00000054384 Vmn1r55E9Q8I6 310 aa11.33□□□□□ -0.6
Retrieved 100 of 22,080 RNA–protein pairs in 88.9 ms