RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Foxj1Q61660 421 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Znf354aQ61751 572 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Arhgef39Q66JY6 344 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Mfsd8Q8BH31 519 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 MastlQ8C0P0 865 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Slc16a14Q8K1C7 512 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Snapc5Q8R2K7 98 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr1052Q8VGR8 312 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cst14Q8VII3 130 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 GMCL1P1Q99N64 498 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Otub2Q9CQX0 234 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tmem41aQ9D8U2 264 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Calm4Q9JM83 148 aa9.73□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr727A2RTN7 324 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 EmdO08579 259 aaKnown RBP9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tspan6O70401 245 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 DhfrP00375 187 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tmem69Q3KQJ0 245 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Xlr4cQ3TKR2 215 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 XkrxQ5GH68 449 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Sgk494Q5SYL1 278 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Pea15Q62048 130 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Alg8Q6P8H8 526 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Thoc7Q7TMY4 204 aaKnown RBP9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfml2aQ8BHP7 681 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 LaynQ8C351 381 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Ssuh2Q8C3L1 340 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cdt1Q8R4E9 557 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Swsap1Q8VCI7 278 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr575Q8VH16 318 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 NansQ99J77 359 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Lactb2Q99KR3 288 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Rab3bQ9CZT8 219 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Xlr4bQ9JJQ7 215 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Scamp4Q9JKV5 230 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Psma6Q9QUM9 246 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Hapln1Q9QUP5 356 aaKnown RBP9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Kcnk7Q9Z2T1 307 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Chst13D3Z6E3 336 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Slc16a5G5E8K6 468 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 PrkcaP20444 672 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tas2r123P59528 333 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 B020004J07RikQ3UTC0 476 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Mtcp1Q60945 107 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Fzd3Q61086 666 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Slitrk5Q810B7 957 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Ugt2a3Q8BWQ1 534 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 IrgcQ8C262 412 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Mettl7a1Q8C6B0 244 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Vmn1r189Q8K3N3 312 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Aimp2Q8R010 320 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Adhfe1Q8R0N6 465 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tm6sf2Q8R1J1 378 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr1461Q8VEV7 312 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr1312Q8VF10 317 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gorasp1Q91X51 446 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Slc41a3Q921R8 488 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Prdm9Q96EQ9 843 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Dcdc2cQ9D1B8 347 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cmtm2aQ9DAR1 169 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 AspdhQ9DCQ2 287 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Yipf5Q9EQQ2 257 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tor1aQ9ER39 333 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 PrelpQ9JK53 378 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Insm2Q9JMC2 493 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cd320Q9Z1P5 260 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Myo18aQ9JMH9 2050 aaKnown RBP9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Zfp442A2AQA0 667 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr520E9Q518 316 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Vmn2r48E9Q5D8 855 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Vmn2r9K7N6Z8 848 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Rbbp9O88851 186 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cd28P31041 218 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Uba1yP31254 1058 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Adamts19P59509 1210 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Sap25Q1EHW4 186 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tmub2Q3V209 319 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Fzd6Q61089 709 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Fndc9Q8BJN4 226 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Entpd8Q8K0L2 497 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr1423Q8VFV0 310 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Asb18Q8VHA6 467 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tram1Q91V04 374 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 LipfQ9CPP7 395 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Hapln2Q9ESM3 341 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Sec61a2Q9JLR1 476 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Nfkb2Q9WTK5 899 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Rbbp6P97868 1790 aaKnown RBP9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm3952A0A0A6YXJ1 191 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm5788A0A1Y7VK80 144 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm14744B1AVU4 173 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 OgdhlE9Q7L0 1029 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 HnrnpkP61979 463 aaKnown RBP9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 ManealQ6P1J0 452 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Nceh1Q8BLF1 408 aaKnown RBP9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Q8BR90 294 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 MaobQ8BW75 520 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 1700020N01RikQ8CF20 87 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr77Q8VEY9 312 aa9.72□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 HnrnpllQ921F4 591 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 108 ms