RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 TEKQ02763 1124 aa15.22■□□□□ 0.03
PHGDH-216ENST00000641375 LPAL2Q16609 132 aa15.22■□□□□ 0.03
PHGDH-216ENST00000641375 GPR141Q7Z602 305 aa15.22■□□□□ 0.03
PHGDH-216ENST00000641375 DAZLQ92904 295 aaKnown RBP15.22■□□□□ 0.03
PHGDH-216ENST00000641375 SLC41A3Q96GZ6 507 aa15.22■□□□□ 0.03
PHGDH-216ENST00000641375 LOXL4Q96JB6 756 aa15.22■□□□□ 0.03
PHGDH-216ENST00000641375 PRR14Q9BWN1 585 aa15.22■□□□□ 0.03
PHGDH-216ENST00000641375 ITPAQ9BY32 194 aa15.22■□□□□ 0.03
PHGDH-216ENST00000641375 TESQ9UGI8 421 aaKnown RBP15.22■□□□□ 0.03
PHGDH-216ENST00000641375 SNX5Q9Y5X3 404 aa15.22■□□□□ 0.03
PHGDH-216ENST00000641375 FRYLO94915 3013 aa15.21■□□□□ 0.03
PHGDH-216ENST00000641375 A0A087WUU8 490 aa15.21■□□□□ 0.03
PHGDH-216ENST00000641375 PTGES3LE9PB15 166 aa15.21■□□□□ 0.03
PHGDH-216ENST00000641375 POLR1CO15160 346 aaPredicted RBP15.21■□□□□ 0.03
PHGDH-216ENST00000641375 SCRG1O75711 98 aa15.21■□□□□ 0.03
PHGDH-216ENST00000641375 ZNF883P0CG24 379 aa15.21■□□□□ 0.03
PHGDH-216ENST00000641375 MMP11P24347 488 aa15.21■□□□□ 0.03
PHGDH-216ENST00000641375 MPLP40238 635 aa15.21■□□□□ 0.03
PHGDH-216ENST00000641375 HOXC5Q00444 222 aa15.21■□□□□ 0.03
PHGDH-216ENST00000641375 ALDH6A1Q02252 535 aaKnown RBP15.21■□□□□ 0.03
PHGDH-216ENST00000641375 DECR1Q16698 335 aa15.21■□□□□ 0.03
PHGDH-216ENST00000641375 ZNF730Q6ZMV8 503 aa15.21■□□□□ 0.03
PHGDH-216ENST00000641375 ZER1Q7Z7L7 766 aa15.21■□□□□ 0.03
PHGDH-216ENST00000641375 ZAR1Q86SH2 424 aa15.21■□□□□ 0.03
PHGDH-216ENST00000641375 BPHLQ86WA6 291 aaPredicted RBP15.21■□□□□ 0.03
PHGDH-216ENST00000641375 GRAMD2AQ8IUY3 354 aa15.21■□□□□ 0.03
PHGDH-216ENST00000641375 OR14A16Q8NHC5 309 aa15.21■□□□□ 0.03
PHGDH-216ENST00000641375 RHOXF1Q8NHV9 184 aa15.21■□□□□ 0.03
PHGDH-216ENST00000641375 ACOT11Q8WXI4 607 aaPredicted RBP15.21■□□□□ 0.03
PHGDH-216ENST00000641375 NODALQ96S42 347 aa15.21■□□□□ 0.03
PHGDH-216ENST00000641375 TUBA1CQ9BQE3 449 aa15.21■□□□□ 0.03
PHGDH-216ENST00000641375 RBM38Q9H0Z9 239 aaKnown RBP15.21■□□□□ 0.03
PHGDH-216ENST00000641375 POLR1BQ9H9Y6 1135 aa15.21■□□□□ 0.03
PHGDH-216ENST00000641375 CCNB1IP1Q9NPC3 277 aa15.21■□□□□ 0.03
PHGDH-216ENST00000641375 C14orf105Q9NVL8 296 aa15.21■□□□□ 0.03
PHGDH-216ENST00000641375 MKL2Q9ULH7 1088 aa15.21■□□□□ 0.03
PHGDH-216ENST00000641375 CCDC160A6NGH7 325 aa15.21■□□□□ 0.02
PHGDH-216ENST00000641375 H3BN98 237 aa15.21■□□□□ 0.02
PHGDH-216ENST00000641375 XPNPEP2O43895 674 aa15.21■□□□□ 0.02
PHGDH-216ENST00000641375 WBP4O75554 376 aaKnown RBP15.21■□□□□ 0.02
PHGDH-216ENST00000641375 IGKV1D-16P01601 117 aa15.21■□□□□ 0.02
PHGDH-216ENST00000641375 DRD5P21918 477 aa15.21■□□□□ 0.02
PHGDH-216ENST00000641375 AVPR2P30518 371 aa15.21■□□□□ 0.02
PHGDH-216ENST00000641375 ZNF141Q15928 474 aa15.21■□□□□ 0.02
PHGDH-216ENST00000641375 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.21■□□□□ 0.02
PHGDH-216ENST00000641375 ZBED5Q49AG3 693 aa15.21■□□□□ 0.02
PHGDH-216ENST00000641375 PDZK1Q5T2W1 519 aa15.21■□□□□ 0.02
PHGDH-216ENST00000641375 PHF19Q5T6S3 580 aa15.21■□□□□ 0.02
PHGDH-216ENST00000641375 GDF7Q7Z4P5 450 aa15.21■□□□□ 0.02
PHGDH-216ENST00000641375 PLPP5Q8NEB5 264 aa15.21■□□□□ 0.02
PHGDH-216ENST00000641375 FNDC8Q8TC99 324 aa15.21■□□□□ 0.02
PHGDH-216ENST00000641375 SLC2A12Q8TD20 617 aa15.21■□□□□ 0.02
PHGDH-216ENST00000641375 OR8D2Q9GZM6 311 aa15.21■□□□□ 0.02
PHGDH-216ENST00000641375 VN1R1Q9GZP7 353 aa15.21■□□□□ 0.02
PHGDH-216ENST00000641375 DUSP21Q9H596 190 aa15.21■□□□□ 0.02
PHGDH-216ENST00000641375 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.21■□□□□ 0.02
PHGDH-216ENST00000641375 SIDT1Q9NXL6 827 aaKnown RBP15.21■□□□□ 0.02
PHGDH-216ENST00000641375 IGLV3-12A0A075B6K2 115 aa15.2■□□□□ 0.02
PHGDH-216ENST00000641375 TRAPPC13A5PLN9 417 aa15.2■□□□□ 0.02
PHGDH-216ENST00000641375 KHNYNO15037 678 aaKnown RBP15.2■□□□□ 0.02
PHGDH-216ENST00000641375 MRPS14O60783 128 aaKnown RBP15.2■□□□□ 0.02
PHGDH-216ENST00000641375 IGKV3-11P04433 115 aa15.2■□□□□ 0.02
PHGDH-216ENST00000641375 POU1F1P28069 291 aa15.2■□□□□ 0.02
PHGDH-216ENST00000641375 PPICP45877 212 aa15.2■□□□□ 0.02
PHGDH-216ENST00000641375 SLC35A2P78381 396 aa15.2■□□□□ 0.02
PHGDH-216ENST00000641375 OCA2Q04671 838 aa15.2■□□□□ 0.02
PHGDH-216ENST00000641375 TRA2AQ13595 282 aaKnown RBP eCLIP15.2■□□□□ 0.02
PHGDH-216ENST00000641375 BMP8AQ7Z5Y6 402 aa15.2■□□□□ 0.02
PHGDH-216ENST00000641375 PPP1R3BQ86XI6 285 aa15.2■□□□□ 0.02
PHGDH-216ENST00000641375 CROCCP3Q8IVE0 287 aa15.2■□□□□ 0.02
PHGDH-216ENST00000641375 SLITRK4Q8IW52 837 aa15.2■□□□□ 0.02
PHGDH-216ENST00000641375 SPARTQ8N0X7 666 aa15.2■□□□□ 0.02
PHGDH-216ENST00000641375 BCORP1Q8N888 145 aa15.2■□□□□ 0.02
PHGDH-216ENST00000641375 ZNF540Q8NDQ6 660 aa15.2■□□□□ 0.02
PHGDH-216ENST00000641375 APH1BQ8WW43 257 aa15.2■□□□□ 0.02
PHGDH-216ENST00000641375 IPCEF1Q8WWN9 437 aaPredicted RBP15.2■□□□□ 0.02
PHGDH-216ENST00000641375 OIT3Q8WWZ8 545 aa15.2■□□□□ 0.02
PHGDH-216ENST00000641375 UBE2FQ969M7 185 aa15.2■□□□□ 0.02
PHGDH-216ENST00000641375 CLIP3Q96DZ5 547 aa15.2■□□□□ 0.02
PHGDH-216ENST00000641375 KRCC1Q9NPI7 259 aaPredicted RBP15.2■□□□□ 0.02
PHGDH-216ENST00000641375 PCDHGA5Q9Y5G8 931 aa15.2■□□□□ 0.02
PHGDH-216ENST00000641375 SPEGQ15772 3267 aa15.2■□□□□ 0.02
PHGDH-216ENST00000641375 DMDP11532 3685 aa15.2■□□□□ 0.02
PHGDH-216ENST00000641375 A8MUA0 341 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 D6RAR5 112 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 NTN3O00634 580 aaPredicted RBP15.19■□□□□ 0.02
PHGDH-216ENST00000641375 FAM20BO75063 409 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 JUNBP17275 347 aaPredicted RBP15.19■□□□□ 0.02
PHGDH-216ENST00000641375 KRT20P35900 424 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 GRK6P43250 576 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 ATP12AP54707 1039 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 PWWP2BQ6NUJ5 590 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 COX15Q7KZN9 410 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 CMIPQ8IY22 773 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 ZNF614Q8N883 585 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 PIGXQ8TBF5 258 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 GNPDA2Q8TDQ7 276 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 ZNF721Q8TF20 911 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 TMIGD2Q96BF3 282 aa15.19■□□□□ 0.02
PHGDH-216ENST00000641375 ZNF559Q9BR84 538 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms