RNA–Protein interactions for RNA: ENST00000641213.1

PHGDH-211, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-211ENST00000641213 ISPDA4D126 451 aa15.85■□□□□ 0.13
PHGDH-211ENST00000641213 CTDSP2O14595 271 aa15.85■□□□□ 0.13
PHGDH-211ENST00000641213 CHST10O43529 356 aa15.85■□□□□ 0.13
PHGDH-211ENST00000641213 BRINP1O60477 761 aa15.85■□□□□ 0.13
PHGDH-211ENST00000641213 LYPD3O95274 346 aa15.85■□□□□ 0.13
PHGDH-211ENST00000641213 CBX7O95931 251 aa15.85■□□□□ 0.13
PHGDH-211ENST00000641213 AK1P00568 194 aa15.85■□□□□ 0.13
PHGDH-211ENST00000641213 SLC35E2P0CK97 266 aa15.85■□□□□ 0.13
PHGDH-211ENST00000641213 BLKP51451 505 aa15.85■□□□□ 0.13
PHGDH-211ENST00000641213 BNC1Q01954 994 aa15.85■□□□□ 0.13
PHGDH-211ENST00000641213 AADACL4Q5VUY2 407 aa15.85■□□□□ 0.13
PHGDH-211ENST00000641213 SHFQ7M4L6 423 aa15.85■□□□□ 0.13
PHGDH-211ENST00000641213 PARGQ86W56 976 aa15.85■□□□□ 0.13
PHGDH-211ENST00000641213 FAM160A2Q8N612 972 aaPredicted RBP15.85■□□□□ 0.13
PHGDH-211ENST00000641213 CLDN22Q8N7P3 220 aa15.85■□□□□ 0.13
PHGDH-211ENST00000641213 C19orf47Q8N9M1 422 aaKnown RBP15.85■□□□□ 0.13
PHGDH-211ENST00000641213 SAMD8Q96LT4 415 aa15.85■□□□□ 0.13
PHGDH-211ENST00000641213 BARHL1Q9BZE3 327 aa15.85■□□□□ 0.13
PHGDH-211ENST00000641213 KRCC1Q9NPI7 259 aaPredicted RBP15.85■□□□□ 0.13
PHGDH-211ENST00000641213 MED17Q9NVC6 651 aa15.85■□□□□ 0.13
PHGDH-211ENST00000641213 KLHL3Q9UH77 587 aa15.85■□□□□ 0.13
PHGDH-211ENST00000641213 ZNF223Q9UK11 482 aaPredicted RBP15.85■□□□□ 0.13
PHGDH-211ENST00000641213 EXOSC1Q9Y3B2 195 aaKnown RBP15.85■□□□□ 0.13
PHGDH-211ENST00000641213 SPIN1Q9Y657 262 aaPredicted RBP15.85■□□□□ 0.13
PHGDH-211ENST00000641213 MED26O95402 600 aa15.84■□□□□ 0.13
PHGDH-211ENST00000641213 LIMS3P0CW19 117 aa15.84■□□□□ 0.13
PHGDH-211ENST00000641213 LIMS4P0CW20 117 aa15.84■□□□□ 0.13
PHGDH-211ENST00000641213 CDH11P55287 796 aa15.84■□□□□ 0.13
PHGDH-211ENST00000641213 STEAP3Q658P3 488 aa15.84■□□□□ 0.13
PHGDH-211ENST00000641213 ZAR1Q86SH2 424 aa15.84■□□□□ 0.13
PHGDH-211ENST00000641213 CCDC190Q86UF4 302 aa15.84■□□□□ 0.13
PHGDH-211ENST00000641213 FAM83FQ8NEG4 500 aaPredicted RBP15.84■□□□□ 0.13
PHGDH-211ENST00000641213 RLN3Q8WXF3 142 aa15.84■□□□□ 0.13
PHGDH-211ENST00000641213 GATAD2BQ8WXI9 593 aa15.84■□□□□ 0.13
PHGDH-211ENST00000641213 TM9SF4Q92544 642 aa15.84■□□□□ 0.13
PHGDH-211ENST00000641213 PMM1Q92871 262 aa15.84■□□□□ 0.13
PHGDH-211ENST00000641213 RFKQ969G6 155 aa15.84■□□□□ 0.13
PHGDH-211ENST00000641213 NELL2Q99435 816 aa15.84■□□□□ 0.13
PHGDH-211ENST00000641213 NKX2-2O95096 273 aa15.83■□□□□ 0.13
PHGDH-211ENST00000641213 GTF2E2P29084 291 aaKnown RBP15.83■□□□□ 0.13
PHGDH-211ENST00000641213 PLAURQ03405 335 aa15.83■□□□□ 0.13
PHGDH-211ENST00000641213 ZNF155Q12901 538 aaPredicted RBP15.83■□□□□ 0.13
PHGDH-211ENST00000641213 MCATQ8IVS2 390 aaKnown RBP15.83■□□□□ 0.13
PHGDH-211ENST00000641213 VWA5B2Q8N398 1253 aa15.83■□□□□ 0.13
PHGDH-211ENST00000641213 AVL9Q8NBF6 648 aa15.83■□□□□ 0.13
PHGDH-211ENST00000641213 OR2T33Q8NG76 320 aa15.83■□□□□ 0.13
PHGDH-211ENST00000641213 OR52R1Q8NGF1 315 aa15.83■□□□□ 0.13
PHGDH-211ENST00000641213 HOXB13Q92826 284 aaPredicted RBP15.83■□□□□ 0.13
PHGDH-211ENST00000641213 MSANTD3Q96H12 275 aa15.83■□□□□ 0.13
PHGDH-211ENST00000641213 DPH1Q9BZG8 443 aa15.83■□□□□ 0.13
PHGDH-211ENST00000641213 SIAEQ9HAT2 523 aa15.83■□□□□ 0.13
PHGDH-211ENST00000641213 TXNL4BQ9NX01 149 aaKnown RBP15.83■□□□□ 0.13
PHGDH-211ENST00000641213 CRNNQ9UBG3 495 aaPredicted RBP15.83■□□□□ 0.13
PHGDH-211ENST00000641213 TRIOO75962 3097 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 PCDH15Q96QU1 1955 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 PNMA8CA0A1B0GUJ8 204 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 UNC119BA6NIH7 251 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 SLC9B1P1A6NJY1 282 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 STK25O00506 426 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 OR10H2O60403 315 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 FMO6PO60774 539 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 SLC2A10O95528 541 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 TSPAN19P0C672 248 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 ZGLP1P0C6A0 271 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 S1PR1P21453 382 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 NUDT1P36639 197 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 MAZP56270 477 aaKnown RBP15.83■□□□□ 0.12
PHGDH-211ENST00000641213 TMEM44Q2T9K0 475 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 SPANXN2Q5MJ10 180 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 HSDL2Q6YN16 418 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 SYT13Q7L8C5 426 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 LAPTM4BQ86VI4 370 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 RNF113BQ8IZP6 322 aaKnown RBP15.83■□□□□ 0.12
PHGDH-211ENST00000641213 BBS1Q8NFJ9 593 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 PFN4Q8NHR9 129 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 TMEM239Q8WW34 195 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 UBQLN3Q9H347 655 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 CAPN10Q9HC96 672 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 SMURF1Q9HCE7 757 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 ISYNA1Q9NPH2 558 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 POLE3Q9NRF9 147 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 SNTG1Q9NSN8 517 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 C20orf141Q9NUB4 165 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 PCDHGB6Q9Y5F9 930 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 CSNK1G3Q9Y6M4 447 aa15.83■□□□□ 0.12
PHGDH-211ENST00000641213 A0A0A6YYC8 382 aaPredicted RBP15.82■□□□□ 0.12
PHGDH-211ENST00000641213 I3L1I5 382 aaPredicted RBP15.82■□□□□ 0.12
PHGDH-211ENST00000641213 KCNK2O95069 426 aa15.82■□□□□ 0.12
PHGDH-211ENST00000641213 HMGN1P05114 100 aa15.82■□□□□ 0.12
PHGDH-211ENST00000641213 CHRNB1P11230 501 aa15.82■□□□□ 0.12
PHGDH-211ENST00000641213 FUT1P19526 365 aa15.82■□□□□ 0.12
PHGDH-211ENST00000641213 MAKP20794 623 aa15.82■□□□□ 0.12
PHGDH-211ENST00000641213 CD79BP40259 229 aa15.82■□□□□ 0.12
PHGDH-211ENST00000641213 GCGRP47871 477 aa15.82■□□□□ 0.12
PHGDH-211ENST00000641213 RORCP51449 518 aa15.82■□□□□ 0.12
PHGDH-211ENST00000641213 FXYD6P3P58550 94 aa15.82■□□□□ 0.12
PHGDH-211ENST00000641213 SLC13A2Q13183 592 aa15.82■□□□□ 0.12
PHGDH-211ENST00000641213 SRSF5Q13243 272 aaKnown RBP15.82■□□□□ 0.12
PHGDH-211ENST00000641213 TPBGQ13641 420 aa15.82■□□□□ 0.12
PHGDH-211ENST00000641213 PRTGQ2VWP7 1150 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms