RNA–Protein interactions for RNA: ENST00000639568.1

PTP4A1-207, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 5

Gene PTP4A1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-207ENST00000639568 TTC4O95801 387 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 CT45A8P0DMV1 189 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 CT45A9P0DMV2 189 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 IFNGR1P15260 489 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 PCSK2P16519 638 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 EPORP19235 508 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 OR3A2P47893 321 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 KCNJ1P48048 391 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 MRPS35P82673 323 aaKnown RBP9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 C17orf67Q0P5P2 114 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 RASGEF1BQ0VAM2 473 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 CUL3Q13618 768 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 ZNF239Q16600 458 aaKnown RBP9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 ERCC6LQ2NKX8 1250 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 MST1LQ2TV78 715 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 CT45A2Q5DJT8 189 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 ARL13AQ5H913 290 aaPredicted RBP9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 CDKL4Q5MAI5 379 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 GRHL2Q6ISB3 625 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 RBMS3Q6XE24 437 aaKnown RBP9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 MARCH3Q86UD3 253 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 CNTN4Q8IWV2 1026 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 CDYL2Q8N8U2 506 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 ZDHHC22Q8N966 263 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 LRRC37BQ96QE4 947 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 SLC6A7Q99884 636 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 TBL1XR1Q9BZK7 514 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 LACRTQ9GZZ8 138 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 NTN4Q9HB63 628 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 PRSS50Q9UI38 385 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 PCDHGA11Q9Y5H2 935 aa9.64□□□□□ -0.87
PTP4A1-207ENST00000639568 A0A087WZY1 265 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 GOLGA6L10A0A0M3HER8 536 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 GUCY1B2O75343 617 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 RAD51DO75771 328 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 MSMBP08118 114 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 PGCP20142 388 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 IGHV1-2P23083 117 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 SERPINF1P36955 418 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 GPX6P59796 221 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 IL13RA1P78552 427 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 E2F2Q14209 437 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 ZNF460Q14592 562 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 LTB4RQ15722 352 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 SH2D4BQ5SQS7 431 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 CPTPQ5TA50 214 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 SLC48A1Q6P1K1 146 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 FCRLAQ7L513 359 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 LRRC70Q7Z2Q7 622 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 SPATA19Q7Z5L4 167 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 ZNF100Q8IYN0 542 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 LILRA2Q8N149 483 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 SLC43A2Q8N370 569 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 GTPBP8Q8N3Z3 284 aaPredicted RBP9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 ANKRD49Q8WVL7 239 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 SIGLEC10Q96LC7 697 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 KLHL15Q96M94 604 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 CD244Q9BZW8 370 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 SLITRK2Q9H156 845 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 ESM1Q9NQ30 184 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 PFDN4Q9NQP4 134 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 FAM120CQ9NX05 1096 aaKnown RBP9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 NTMQ9P121 344 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 MCM8Q9UJA3 840 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 PPIAL4AQ9Y536 164 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 SLC25A15Q9Y619 301 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 ZNF780BQ9Y6R6 833 aa9.63□□□□□ -0.87
PTP4A1-207ENST00000639568 LOC105371242A0A075B767 164 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 A0A1W2PR80 420 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 FOXE1O00358 373 aaPredicted RBP9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 CLDN9O95484 217 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 PNPP00491 289 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 KLK1P06870 262 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 COX5AP20674 150 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 FPR2P25090 351 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 SFTPDP35247 375 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 IDH3GP51553 393 aaPredicted RBP9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 ZNF41P51814 821 aaPredicted RBP9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 RAB10P61026 200 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 CSTF3Q12996 717 aaKnown RBP9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 TRIP10Q15642 601 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 SPANXN3Q5MJ09 141 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 CCNYL2Q5T2Q4 361 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 TEDDM1Q5T9Z0 273 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 NPSR1Q6W5P4 371 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 UBE2J2Q8N2K1 259 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 AGGF1Q8N302 714 aaeCLIP9.62□□□□□ -0.873e-7■□□□□ 8.1
PTP4A1-207ENST00000639568 ZNF433Q8N7K0 673 aaPredicted RBP9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 OR4N2Q8NGD1 307 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 OR51F2Q8NH61 342 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 WDR60Q8WVS4 1066 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 KLHL29Q96CT2 875 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 CERS2Q96G23 380 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 RNF145Q96MT1 663 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 VSTM2LQ96N03 204 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 CCT8L2Q96SF2 557 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 RTN4RQ9BZR6 473 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 KLHL9Q9P2J3 617 aa9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 ING1Q9UK53 422 aaPredicted RBP9.62□□□□□ -0.87
PTP4A1-207ENST00000639568 ZKSCAN5Q9Y2L8 839 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms