RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 TUBGCP3Q96CW5 907 aa20.5■□□□□ 0.87
FAM228B-208ENST00000613899 STACQ99469 402 aa20.5■□□□□ 0.87
FAM228B-208ENST00000613899 PINK1Q9BXM7 581 aa20.5■□□□□ 0.87
FAM228B-208ENST00000613899 NEUROD4Q9HD90 331 aa20.5■□□□□ 0.87
FAM228B-208ENST00000613899 DUSP22Q9NRW4 184 aa20.5■□□□□ 0.87
FAM228B-208ENST00000613899 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.5■□□□□ 0.87
FAM228B-208ENST00000613899 ZNF175Q9Y473 711 aa20.5■□□□□ 0.87
FAM228B-208ENST00000613899 SNX8Q9Y5X2 465 aa20.5■□□□□ 0.87
FAM228B-208ENST00000613899 V9GYY5 206 aaPredicted RBP20.5■□□□□ 0.87
FAM228B-208ENST00000613899 MED13LQ71F56 2210 aa20.5■□□□□ 0.87
FAM228B-208ENST00000613899 A0A087WZY1 265 aa20.49■□□□□ 0.87
FAM228B-208ENST00000613899 A8MXE2 369 aa20.49■□□□□ 0.87
FAM228B-208ENST00000613899 MSTNO14793 375 aa20.49■□□□□ 0.87
FAM228B-208ENST00000613899 RGS16O15492 202 aaPredicted RBP20.49■□□□□ 0.87
FAM228B-208ENST00000613899 CTIFO43310 598 aaKnown RBP20.49■□□□□ 0.87
FAM228B-208ENST00000613899 HMGN2P05204 90 aaKnown RBP20.49■□□□□ 0.87
FAM228B-208ENST00000613899 LAMP1P11279 417 aa20.49■□□□□ 0.87
FAM228B-208ENST00000613899 PRPS1L1P21108 318 aa20.49■□□□□ 0.87
FAM228B-208ENST00000613899 IST1P53990 364 aa20.49■□□□□ 0.87
FAM228B-208ENST00000613899 CLDN15P56746 228 aa20.49■□□□□ 0.87
FAM228B-208ENST00000613899 POU6F2P78424 691 aaPredicted RBP20.49■□□□□ 0.87
FAM228B-208ENST00000613899 MAD2L1Q13257 205 aaPredicted RBP20.49■□□□□ 0.87
FAM228B-208ENST00000613899 LASP1Q14847 261 aaKnown RBP20.49■□□□□ 0.87
FAM228B-208ENST00000613899 IL23RQ5VWK5 629 aa20.49■□□□□ 0.87
FAM228B-208ENST00000613899 OR56A1Q8NGH5 318 aa20.49■□□□□ 0.87
FAM228B-208ENST00000613899 PSMA8Q8TAA3 256 aa20.49■□□□□ 0.87
FAM228B-208ENST00000613899 OR5P2Q8WZ92 322 aa20.49■□□□□ 0.87
FAM228B-208ENST00000613899 SMPDL3BQ92485 455 aa20.49■□□□□ 0.87
FAM228B-208ENST00000613899 CHMP6Q96FZ7 201 aa20.49■□□□□ 0.87
FAM228B-208ENST00000613899 C16orf58Q96GQ5 468 aa20.49■□□□□ 0.87
FAM228B-208ENST00000613899 YIPF4Q9BSR8 244 aa20.49■□□□□ 0.87
FAM228B-208ENST00000613899 BTBD2Q9BX70 525 aa20.49■□□□□ 0.87
FAM228B-208ENST00000613899 UBQLN4Q9NRR5 601 aa20.49■□□□□ 0.87
FAM228B-208ENST00000613899 GIN1Q9NXP7 522 aa20.49■□□□□ 0.87
FAM228B-208ENST00000613899 ST6GALNAC2Q9UJ37 374 aa20.49■□□□□ 0.87
FAM228B-208ENST00000613899 EIF3LQ9Y262 564 aaKnown RBP20.49■□□□□ 0.87
FAM228B-208ENST00000613899 VDAC3Q9Y277 283 aa20.49■□□□□ 0.87
FAM228B-208ENST00000613899 H0YC42 278 aa20.48■□□□□ 0.87
FAM228B-208ENST00000613899 SCDO00767 359 aa20.48■□□□□ 0.87
FAM228B-208ENST00000613899 GMFGO60234 142 aa20.48■□□□□ 0.87
FAM228B-208ENST00000613899 KRT16P08779 473 aa20.48■□□□□ 0.87
FAM228B-208ENST00000613899 FCGR2AP12318 317 aa20.48■□□□□ 0.87
FAM228B-208ENST00000613899 CPOXP36551 454 aa20.48■□□□□ 0.87
FAM228B-208ENST00000613899 SUCLG1P53597 346 aaKnown RBP20.48■□□□□ 0.87
FAM228B-208ENST00000613899 TPD52P55327 224 aaPredicted RBP20.48■□□□□ 0.87
FAM228B-208ENST00000613899 ZNF844Q08AG5 666 aa20.48■□□□□ 0.87
FAM228B-208ENST00000613899 TMEM44Q2T9K0 475 aa20.48■□□□□ 0.87
FAM228B-208ENST00000613899 LSM12Q3MHD2 195 aaKnown RBP20.48■□□□□ 0.87
FAM228B-208ENST00000613899 METTL25Q8N6Q8 603 aa20.48■□□□□ 0.87
FAM228B-208ENST00000613899 CNEP1R1Q8N9A8 125 aa20.48■□□□□ 0.87
FAM228B-208ENST00000613899 FIG4Q92562 907 aa20.48■□□□□ 0.87
FAM228B-208ENST00000613899 OTUB1Q96FW1 271 aaPredicted RBP20.48■□□□□ 0.87
FAM228B-208ENST00000613899 DACH2Q96NX9 599 aa20.48■□□□□ 0.87
FAM228B-208ENST00000613899 ZIM3Q96PE6 472 aa20.48■□□□□ 0.87
FAM228B-208ENST00000613899 PIGUQ9H490 435 aa20.48■□□□□ 0.87
FAM228B-208ENST00000613899 SSU72Q9NP77 194 aaKnown RBP20.48■□□□□ 0.87
FAM228B-208ENST00000613899 HRNRQ86YZ3 2850 aaPredicted RBP20.48■□□□□ 0.87
FAM228B-208ENST00000613899 A0A1W2PQD3 144 aa20.47■□□□□ 0.87
FAM228B-208ENST00000613899 SMNDC1O75940 238 aaKnown RBP eCLIP20.47■□□□□ 0.87
FAM228B-208ENST00000613899 SOX30O94993 753 aa20.47■□□□□ 0.87
FAM228B-208ENST00000613899 SERPINE1P05121 402 aa20.47■□□□□ 0.87
FAM228B-208ENST00000613899 CCT3P49368 545 aaKnown RBP20.47■□□□□ 0.87
FAM228B-208ENST00000613899 ZNF41P51814 821 aaPredicted RBP20.47■□□□□ 0.87
FAM228B-208ENST00000613899 CLDN20P56880 219 aa20.47■□□□□ 0.87
FAM228B-208ENST00000613899 FGFBP1Q14512 234 aa20.47■□□□□ 0.87
FAM228B-208ENST00000613899 PON3Q15166 354 aa20.47■□□□□ 0.87
FAM228B-208ENST00000613899 SPDYE7PQ495Y7 208 aa20.47■□□□□ 0.87
FAM228B-208ENST00000613899 CDC73Q6P1J9 531 aa20.47■□□□□ 0.87
FAM228B-208ENST00000613899 ZAR1Q86SH2 424 aa20.47■□□□□ 0.87
FAM228B-208ENST00000613899 GATSQ8NAP1 163 aa20.47■□□□□ 0.87
FAM228B-208ENST00000613899 SFXN5Q8TD22 340 aa20.47■□□□□ 0.87
FAM228B-208ENST00000613899 ACTRT2Q8TDY3 377 aa20.47■□□□□ 0.87
FAM228B-208ENST00000613899 ZBTB8AQ96BR9 441 aa20.47■□□□□ 0.87
FAM228B-208ENST00000613899 MOAP1Q96BY2 351 aa20.47■□□□□ 0.87
FAM228B-208ENST00000613899 COQ8BQ96D53 544 aa20.47■□□□□ 0.87
FAM228B-208ENST00000613899 PKNOX2Q96KN3 472 aa20.47■□□□□ 0.87
FAM228B-208ENST00000613899 FOXC2Q99958 501 aa20.47■□□□□ 0.87
FAM228B-208ENST00000613899 BHLHE41Q9C0J9 482 aaPredicted RBP20.47■□□□□ 0.87
FAM228B-208ENST00000613899 RNF122Q9H9V4 155 aa20.47■□□□□ 0.87
FAM228B-208ENST00000613899 FAF1Q9UNN5 650 aaPredicted RBP20.47■□□□□ 0.87
FAM228B-208ENST00000613899 SH3D21A4FU49 640 aa20.46■□□□□ 0.87
FAM228B-208ENST00000613899 TM9SF1O15321 606 aa20.46■□□□□ 0.87
FAM228B-208ENST00000613899 ATP6V1C1P21283 382 aa20.46■□□□□ 0.87
FAM228B-208ENST00000613899 DNASE1P24855 282 aa20.46■□□□□ 0.87
FAM228B-208ENST00000613899 PCYT1AP49585 367 aa20.46■□□□□ 0.87
FAM228B-208ENST00000613899 TP53BP2Q13625 1128 aa20.46■□□□□ 0.87
FAM228B-208ENST00000613899 SGCBQ16585 318 aa20.46■□□□□ 0.87
FAM228B-208ENST00000613899 SMU1Q2TAY7 513 aa20.46■□□□□ 0.87
FAM228B-208ENST00000613899 CCNJQ5T5M9 372 aa20.46■□□□□ 0.87
FAM228B-208ENST00000613899 VWA1Q6PCB0 445 aa20.46■□□□□ 0.87
FAM228B-208ENST00000613899 GTPBP8Q8N3Z3 284 aaPredicted RBP20.46■□□□□ 0.87
FAM228B-208ENST00000613899 KRTCAP2Q8N6L1 136 aa20.46■□□□□ 0.87
FAM228B-208ENST00000613899 FNDC9Q8TBE3 224 aa20.46■□□□□ 0.87
FAM228B-208ENST00000613899 CDS1Q92903 461 aa20.46■□□□□ 0.87
FAM228B-208ENST00000613899 STARD4Q96DR4 205 aa20.46■□□□□ 0.87
FAM228B-208ENST00000613899 ACTRT3Q9BYD9 372 aa20.46■□□□□ 0.87
FAM228B-208ENST00000613899 PARD6BQ9BYG5 372 aa20.46■□□□□ 0.87
FAM228B-208ENST00000613899 CXorf36Q9H7Y0 433 aa20.46■□□□□ 0.87
FAM228B-208ENST00000613899 CCM2LQ9NUG4 571 aaPredicted RBP20.46■□□□□ 0.87
FAM228B-208ENST00000613899 FBXO34Q9NWN3 711 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms