RNA–Protein interactions for RNA: ENST00000594092.5

VRK3-207, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VRK3, Length 1,831 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-207ENST00000594092 PCDH17O14917 1159 aa14□□□□□ -0.17
VRK3-207ENST00000594092 FUT4P22083 530 aa14□□□□□ -0.17
VRK3-207ENST00000594092 MMP11P24347 488 aa14□□□□□ -0.17
VRK3-207ENST00000594092 RNF144AP50876 292 aaPredicted RBP14□□□□□ -0.17
VRK3-207ENST00000594092 DAPP51397 102 aa14□□□□□ -0.17
VRK3-207ENST00000594092 ATP12AP54707 1039 aa14□□□□□ -0.17
VRK3-207ENST00000594092 RPS18P62269 152 aaKnown RBP14□□□□□ -0.17
VRK3-207ENST00000594092 BLMHQ13867 455 aa14□□□□□ -0.17
VRK3-207ENST00000594092 ZNF141Q15928 474 aa14□□□□□ -0.17
VRK3-207ENST00000594092 MRPL2Q5T653 305 aaKnown RBP14□□□□□ -0.17
VRK3-207ENST00000594092 RNF220Q5VTB9 566 aa14□□□□□ -0.17
VRK3-207ENST00000594092 TTC23Q5W5X9 447 aa14□□□□□ -0.17
VRK3-207ENST00000594092 ANKRD34AQ69YU3 496 aa14□□□□□ -0.17
VRK3-207ENST00000594092 TMEM154Q6P9G4 183 aa14□□□□□ -0.17
VRK3-207ENST00000594092 TAGAPQ8N103 731 aa14□□□□□ -0.17
VRK3-207ENST00000594092 OR4C15Q8NGM1 316 aa14□□□□□ -0.17
VRK3-207ENST00000594092 OR52J3Q8NH60 311 aa14□□□□□ -0.17
VRK3-207ENST00000594092 GIPC3Q8TF64 312 aa14□□□□□ -0.17
VRK3-207ENST00000594092 PHF10Q8WUB8 498 aaKnown RBP14□□□□□ -0.17
VRK3-207ENST00000594092 HSPBAP1Q96EW2 488 aa14□□□□□ -0.17
VRK3-207ENST00000594092 ZNF700Q9H0M5 742 aa14□□□□□ -0.17
VRK3-207ENST00000594092 POLR1BQ9H9Y6 1135 aa14□□□□□ -0.17
VRK3-207ENST00000594092 PNPLA3Q9NST1 481 aa14□□□□□ -0.17
VRK3-207ENST00000594092 ACER3Q9NUN7 267 aa14□□□□□ -0.17
VRK3-207ENST00000594092 TMEFF2Q9UIK5 374 aaPredicted RBP14□□□□□ -0.17
VRK3-207ENST00000594092 ACAD8Q9UKU7 415 aa14□□□□□ -0.17
VRK3-207ENST00000594092 FARSAQ9Y285 508 aaKnown RBP14□□□□□ -0.17
VRK3-207ENST00000594092 IGHV1-45A0A0A0MS14 117 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 TRBV11-1A0A0K0K1C0 115 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 TNFAIP8O95379 198 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 IGHEP01854 428 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 GNAO1P09471 354 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 COX6A1P12074 109 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 CDH2P19022 906 aaPredicted RBP13.99□□□□□ -0.17
VRK3-207ENST00000594092 HMGA2P52926 109 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 PSMD4P55036 377 aaKnown RBP13.99□□□□□ -0.17
VRK3-207ENST00000594092 GABREP78334 506 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 MICAQ29983 383 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 EXOC3L2Q2M3D2 409 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 COLEC12Q5KU26 742 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 KDM4DQ6B0I6 523 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 KIRREL2Q6UWL6 708 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 TSPYL5Q86VY4 417 aaPredicted RBP13.99□□□□□ -0.17
VRK3-207ENST00000594092 PRR22Q8IZ63 422 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 NLGN4XQ8N0W4 816 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 NLGN4YQ8NFZ3 816 aaPredicted RBP13.99□□□□□ -0.17
VRK3-207ENST00000594092 OR10G2Q8NGC3 310 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 OR4C3Q8NH37 302 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 NUBPLQ8TB37 319 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 DIO2Q92813 273 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 MBOAT4Q96T53 435 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 LIN28AQ9H9Z2 209 aaKnown RBP13.99□□□□□ -0.17
VRK3-207ENST00000594092 BATF3Q9NR55 127 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 KRT84Q9NSB2 600 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 RHCGQ9UBD6 479 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 MRTO4Q9UKD2 239 aaKnown RBP13.99□□□□□ -0.17
VRK3-207ENST00000594092 A4GNTQ9UNA3 340 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 PCDHGB5Q9Y5G0 923 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 CEP250Q9BV73 2442 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 PTPRZ1P23471 2315 aaPredicted RBP13.99□□□□□ -0.17
VRK3-207ENST00000594092 CDHR4A6H8M9 788 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 SOCS6O14544 535 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 SLC30A4O14863 429 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 RAD1O60671 282 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 TPST2O60704 377 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 STAT5AP42229 794 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 RGS8P57771 180 aaPredicted RBP13.99□□□□□ -0.17
VRK3-207ENST00000594092 SMIM11AP58511 58 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 IL1RL1Q01638 556 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 PLAURQ03405 335 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 FAHD1Q6P587 224 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 SLC34A3Q8N130 599 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 ZNF614Q8N883 585 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 OR8K3Q8NH51 312 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 ADAMTS14Q8WXS8 1223 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 TP53INP1Q96A56 240 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 DHRS1Q96LJ7 313 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 NMNAT1Q9HAN9 279 aaPredicted RBP13.99□□□□□ -0.17
VRK3-207ENST00000594092 FAM118AQ9NWS6 357 aa13.99□□□□□ -0.17
VRK3-207ENST00000594092 A0A1W2PQ72 361 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 TMEM200CA6NKL6 621 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 TSPAN2O60636 221 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 BCAS1O75363 584 aaPredicted RBP13.98□□□□□ -0.17
VRK3-207ENST00000594092 REM1O75628 298 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 CCNB2O95067 398 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 CLIC3O95833 236 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 LIMS1P48059 325 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 RPS15P62841 145 aaKnown RBP13.98□□□□□ -0.17
VRK3-207ENST00000594092 HOXC5Q00444 222 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 MYBPC1Q00872 1141 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 PLCXD2Q0VAA5 305 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 KCNAB2Q13303 367 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 PIN1Q13526 163 aaPredicted RBP13.98□□□□□ -0.17
VRK3-207ENST00000594092 DNASE1L3Q13609 305 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 USP51Q70EK9 711 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 GALNT5Q7Z7M9 940 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 PIK3C3Q8NEB9 887 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 OR11G2Q8NGC1 345 aa13.98□□□□□ -0.17
VRK3-207ENST00000594092 THAP3Q8WTV1 239 aaPredicted RBP13.98□□□□□ -0.17
VRK3-207ENST00000594092 IMMP1LQ96LU5 166 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms