RNA–Protein interactions for RNA: ENST00000589419.1

CCBE1-204, Transcript of collagen and calcium binding EGF domains 1, humanhuman

TSL 4

Gene CCBE1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-204ENST00000589419 ARHGDIAP52565 204 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 SMIM11AP58511 58 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 SPIBQ01892 262 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 CHAF1BQ13112 559 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 KLHL26Q53HC5 615 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 PPP4R4Q6NUP7 873 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 TCTN3Q6NUS6 607 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 DEF8Q6ZN54 512 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 HMGN2P46Q86SG4 172 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 RANBP3LQ86VV4 465 aaPredicted RBP12.75□□□□□ -0.37
CCBE1-204ENST00000589419 ZDHHC13Q8IUH4 622 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 LACC1Q8IV20 430 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 ZNF440Q8IYI8 595 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 DND1Q8IYX4 353 aaKnown RBP12.75□□□□□ -0.37
CCBE1-204ENST00000589419 OFCC1Q8IZS5 231 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 CLIP4Q8N3C7 705 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 OR4D11Q8NGI4 311 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 OR6T1Q8NGN1 323 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 VANGL1Q8TAA9 524 aaPredicted RBP12.75□□□□□ -0.37
CCBE1-204ENST00000589419 PHF10Q8WUB8 498 aaKnown RBP12.75□□□□□ -0.37
CCBE1-204ENST00000589419 PRRC1Q96M27 445 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 LMF1Q96S06 567 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 CIB1Q99828 191 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 GPN2Q9H9Y4 310 aaPredicted RBP12.75□□□□□ -0.37
CCBE1-204ENST00000589419 ZNF160Q9HCG1 818 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 P4HTMQ9NXG6 502 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 TESQ9UGI8 421 aaKnown RBP12.75□□□□□ -0.37
CCBE1-204ENST00000589419 FBXL4Q9UKA2 621 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 SAMHD1Q9Y3Z3 626 aaKnown RBP12.75□□□□□ -0.37
CCBE1-204ENST00000589419 NPFFR2Q9Y5X5 522 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 LYVE1Q9Y5Y7 322 aa12.75□□□□□ -0.37
CCBE1-204ENST00000589419 NINQ8N4C6 2090 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 SERINC4A6NH21 518 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 G3V2T6 193 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 H3BNH8 94 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 AP3D1O14617 1153 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 DIRAS1O95057 198 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 OXSR1O95747 527 aaPredicted RBP12.74□□□□□ -0.37
CCBE1-204ENST00000589419 HPRP00739 348 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 SERPINA7P05543 415 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 CYP4B1P13584 511 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 ZNF26P17031 533 aaPredicted RBP12.74□□□□□ -0.37
CCBE1-204ENST00000589419 RRM2P31350 389 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 IFNA8P32881 189 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 HSPA13P48723 471 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 IL10RAQ13651 578 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 NPTX1Q15818 432 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 LRRC36Q1X8D7 754 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 FNDC7Q5VTL7 733 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 IZUMO2Q6UXV1 221 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 ZBTB49Q6ZSB9 765 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 ZNF550Q7Z398 422 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 CBR4Q8N4T8 237 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 PIK3C3Q8NEB9 887 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 FAM71CQ8NEG0 241 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 OR4C15Q8NGM1 316 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 TTC9Q92623 222 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 ADOQ96SZ5 270 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 ZNF184Q99676 751 aaPredicted RBP12.74□□□□□ -0.37
CCBE1-204ENST00000589419 PSD2Q9BQI7 771 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 ANKRD19PQ9H560 264 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 EXOSC3Q9NQT5 275 aaKnown RBP12.74□□□□□ -0.37
CCBE1-204ENST00000589419 VNN3Q9NY84 501 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 USE1Q9NZ43 259 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 PRDM4Q9UKN5 801 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 A4GNTQ9UNA3 340 aa12.74□□□□□ -0.37
CCBE1-204ENST00000589419 PTPRZ1P23471 2315 aaPredicted RBP12.73□□□□□ -0.37
CCBE1-204ENST00000589419 CDC14CA4D256 554 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 ARRDC5A6NEK1 342 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 ALG1L2C9J202 215 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 TNFRSF11BO00300 401 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 ICOSLGO75144 302 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 OR5F1O95221 314 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 H1F0P07305 194 aaKnown RBP12.73□□□□□ -0.37
CCBE1-204ENST00000589419 FBXO45P0C2W1 286 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 THRBP10828 461 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 HPGDP15428 266 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 LIMS1P48059 325 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 HMGA2P52926 109 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 PLAURQ03405 335 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 DAG1Q14118 895 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 COLEC12Q5KU26 742 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 JMJD6Q6NYC1 403 aaPredicted RBP12.73□□□□□ -0.37
CCBE1-204ENST00000589419 NUP54Q7Z3B4 507 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 RBM45Q8IUH3 476 aaKnown RBP12.73□□□□□ -0.37
CCBE1-204ENST00000589419 MISPQ8IVT2 679 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 PRR22Q8IZ63 422 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 SLC5A8Q8N695 610 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 ZNF614Q8N883 585 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 TOR1AIP2Q8NFQ8 470 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 OR4C3Q8NH37 302 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 RNF138Q8WVD3 245 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 RDH12Q96NR8 316 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 RBM4BQ9BQ04 359 aaKnown RBP12.73□□□□□ -0.37
CCBE1-204ENST00000589419 ZNF559Q9BR84 538 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 TACO1Q9BSH4 297 aaKnown RBP12.73□□□□□ -0.37
CCBE1-204ENST00000589419 RBM4Q9BWF3 364 aaKnown RBP12.73□□□□□ -0.37
CCBE1-204ENST00000589419 COQ10BQ9H8M1 238 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 HHATLQ9HCP6 504 aa12.73□□□□□ -0.37
CCBE1-204ENST00000589419 DNAJB12Q9NXW2 375 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms