RNA–Protein interactions for RNA: ENST00000582844.5

CSNK1D-221, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 957 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-221ENST00000582844 TMEM44Q2T9K0 475 aa19.18■□□□□ 0.66
CSNK1D-221ENST00000582844 EXOSC6Q5RKV6 272 aaKnown RBP19.18■□□□□ 0.66
CSNK1D-221ENST00000582844 CCNJQ5T5M9 372 aa19.18■□□□□ 0.66
CSNK1D-221ENST00000582844 FBXW10Q5XX13 1052 aa19.18■□□□□ 0.66
CSNK1D-221ENST00000582844 OR2A2Q6IF42 318 aa19.18■□□□□ 0.66
CSNK1D-221ENST00000582844 VWA1Q6PCB0 445 aa19.18■□□□□ 0.66
CSNK1D-221ENST00000582844 KRTCAP2Q8N6L1 136 aa19.18■□□□□ 0.66
CSNK1D-221ENST00000582844 COX18Q8N8Q8 333 aa19.18■□□□□ 0.66
CSNK1D-221ENST00000582844 CNEP1R1Q8N9A8 125 aa19.18■□□□□ 0.66
CSNK1D-221ENST00000582844 FNDC5Q8NAU1 212 aa19.18■□□□□ 0.66
CSNK1D-221ENST00000582844 SMPDL3BQ92485 455 aa19.18■□□□□ 0.66
CSNK1D-221ENST00000582844 JADE3Q92613 823 aa19.18■□□□□ 0.66
CSNK1D-221ENST00000582844 STARD4Q96DR4 205 aa19.18■□□□□ 0.66
CSNK1D-221ENST00000582844 ZNF845Q96IR2 970 aaPredicted RBP19.18■□□□□ 0.66
CSNK1D-221ENST00000582844 VDAC3Q9Y277 283 aa19.18■□□□□ 0.66
CSNK1D-221ENST00000582844 SNX8Q9Y5X2 465 aa19.18■□□□□ 0.66
CSNK1D-221ENST00000582844 SETD2Q9BYW2 2564 aaPredicted RBP19.17■□□□□ 0.66
CSNK1D-221ENST00000582844 SMNDC1O75940 238 aaKnown RBP eCLIP19.17■□□□□ 0.664e-6■■■■□ 24.8
CSNK1D-221ENST00000582844 CRHP06850 196 aa19.17■□□□□ 0.66
CSNK1D-221ENST00000582844 NGFRP08138 427 aa19.17■□□□□ 0.66
CSNK1D-221ENST00000582844 DDX5P17844 614 aaKnown RBP19.17■□□□□ 0.66
CSNK1D-221ENST00000582844 PRIM2P49643 509 aa19.17■□□□□ 0.66
CSNK1D-221ENST00000582844 CPTPQ5TA50 214 aa19.17■□□□□ 0.66
CSNK1D-221ENST00000582844 NUDCD3Q8IVD9 361 aa19.17■□□□□ 0.66
CSNK1D-221ENST00000582844 FNDC9Q8TBE3 224 aa19.17■□□□□ 0.66
CSNK1D-221ENST00000582844 NINJ1Q92982 152 aa19.17■□□□□ 0.66
CSNK1D-221ENST00000582844 TUBGCP3Q96CW5 907 aa19.17■□□□□ 0.66
CSNK1D-221ENST00000582844 PKNOX2Q96KN3 472 aa19.17■□□□□ 0.66
CSNK1D-221ENST00000582844 NPAS1Q99742 590 aa19.17■□□□□ 0.66
CSNK1D-221ENST00000582844 ZNF395Q9H8N7 513 aaPredicted RBP19.17■□□□□ 0.66
CSNK1D-221ENST00000582844 PLEKHA6Q9Y2H5 1048 aa19.17■□□□□ 0.66
CSNK1D-221ENST00000582844 AP4B1Q9Y6B7 739 aa19.17■□□□□ 0.66
CSNK1D-221ENST00000582844 WDR91A4D1P6 747 aa19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 MSTNO14793 375 aa19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 CTIFO43310 598 aaKnown RBP19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 ITM2AO43736 263 aa19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 LYPLA1O75608 230 aaPredicted RBP19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 CPOXP36551 454 aa19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 KIR2DL2P43627 348 aaPredicted RBP19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 SERPINB4P48594 390 aa19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 POU6F2P78424 691 aaPredicted RBP19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 LASP1Q14847 261 aaKnown RBP19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 PON3Q15166 354 aa19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 KRT71Q3SY84 523 aa19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 BTLAQ7Z6A9 289 aa19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 MREGQ8N565 214 aa19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 OR5P2Q8WZ92 322 aa19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 CDS1Q92903 461 aa19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 COQ8BQ96D53 544 aa19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 CHMP6Q96FZ7 201 aa19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 DACH2Q96NX9 599 aa19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 FOXC2Q99958 501 aa19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 BTBD2Q9BX70 525 aa19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 PARD6BQ9BYG5 372 aa19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 CXorf36Q9H7Y0 433 aa19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 UBQLN4Q9NRR5 601 aa19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 MTORP42345 2549 aa19.16■□□□□ 0.66
CSNK1D-221ENST00000582844 SH3D21A4FU49 640 aa19.15■□□□□ 0.66
CSNK1D-221ENST00000582844 C6orf47O95873 294 aa19.15■□□□□ 0.66
CSNK1D-221ENST00000582844 HPGDP15428 266 aa19.15■□□□□ 0.66
CSNK1D-221ENST00000582844 CCT3P49368 545 aaKnown RBP19.15■□□□□ 0.66
CSNK1D-221ENST00000582844 SIRPAP78324 504 aa19.15■□□□□ 0.66
CSNK1D-221ENST00000582844 ZNF844Q08AG5 666 aa19.15■□□□□ 0.66
CSNK1D-221ENST00000582844 FAM27E3Q08E93 113 aa19.15■□□□□ 0.66
CSNK1D-221ENST00000582844 GGNQ86UU5 652 aa19.15■□□□□ 0.66
CSNK1D-221ENST00000582844 RIMKLAQ8IXN7 391 aa19.15■□□□□ 0.66
CSNK1D-221ENST00000582844 PPP1R14CQ8TAE6 165 aa19.15■□□□□ 0.66
CSNK1D-221ENST00000582844 PGM2Q96G03 612 aa19.15■□□□□ 0.66
CSNK1D-221ENST00000582844 SH3YL1Q96HL8 342 aaPredicted RBP19.15■□□□□ 0.66
CSNK1D-221ENST00000582844 STACQ99469 402 aa19.15■□□□□ 0.66
CSNK1D-221ENST00000582844 KLHDC3Q9BQ90 382 aa19.15■□□□□ 0.66
CSNK1D-221ENST00000582844 OPN3Q9H1Y3 402 aaPredicted RBP19.15■□□□□ 0.66
CSNK1D-221ENST00000582844 PIGUQ9H490 435 aa19.15■□□□□ 0.66
CSNK1D-221ENST00000582844 RNF122Q9H9V4 155 aa19.15■□□□□ 0.66
CSNK1D-221ENST00000582844 DUSP22Q9NRW4 184 aa19.15■□□□□ 0.66
CSNK1D-221ENST00000582844 ATAD3AQ9NVI7 634 aa19.15■□□□□ 0.66
CSNK1D-221ENST00000582844 ZNF175Q9Y473 711 aa19.15■□□□□ 0.66
CSNK1D-221ENST00000582844 HSPA4LO95757 839 aa19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 OPN1LWP04000 364 aa19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 G6PDP11413 515 aa19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 DNASE1P24855 282 aa19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 LCN1P31025 176 aa19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 RPS3AP61247 264 aaKnown RBP19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 TP53BP2Q13625 1128 aa19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 POU4F3Q15319 338 aa19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 CD226Q15762 336 aa19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 SGCBQ16585 318 aa19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 CDC73Q6P1J9 531 aa19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 ZNF474Q6S9Z5 364 aaPredicted RBP19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 METTL25Q8N6Q8 603 aa19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 PSMA8Q8TAA3 256 aa19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 ZBTB9Q96C00 473 aa19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 PRPF18Q99633 342 aaKnown RBP19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 ACTRT3Q9BYD9 372 aa19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 CXXC4Q9H2H0 198 aa19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 HHATLQ9HCP6 504 aa19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 EDARQ9UNE0 448 aa19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 EIF3LQ9Y262 564 aaKnown RBP19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 KCNE3Q9Y6H6 103 aa19.14■□□□□ 0.65
CSNK1D-221ENST00000582844 C2CD3Q4AC94 2353 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms