RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 TMEM44Q2T9K0 475 aa19.18■□□□□ 0.66
CSNK1D-215ENST00000580784 EXOSC6Q5RKV6 272 aaKnown RBP19.18■□□□□ 0.66
CSNK1D-215ENST00000580784 CCNJQ5T5M9 372 aa19.18■□□□□ 0.66
CSNK1D-215ENST00000580784 FBXW10Q5XX13 1052 aa19.18■□□□□ 0.66
CSNK1D-215ENST00000580784 OR2A2Q6IF42 318 aa19.18■□□□□ 0.66
CSNK1D-215ENST00000580784 VWA1Q6PCB0 445 aa19.18■□□□□ 0.66
CSNK1D-215ENST00000580784 KRTCAP2Q8N6L1 136 aa19.18■□□□□ 0.66
CSNK1D-215ENST00000580784 COX18Q8N8Q8 333 aa19.18■□□□□ 0.66
CSNK1D-215ENST00000580784 CNEP1R1Q8N9A8 125 aa19.18■□□□□ 0.66
CSNK1D-215ENST00000580784 FNDC5Q8NAU1 212 aa19.18■□□□□ 0.66
CSNK1D-215ENST00000580784 SMPDL3BQ92485 455 aa19.18■□□□□ 0.66
CSNK1D-215ENST00000580784 JADE3Q92613 823 aa19.18■□□□□ 0.66
CSNK1D-215ENST00000580784 STARD4Q96DR4 205 aa19.18■□□□□ 0.66
CSNK1D-215ENST00000580784 ZNF845Q96IR2 970 aaPredicted RBP19.18■□□□□ 0.66
CSNK1D-215ENST00000580784 VDAC3Q9Y277 283 aa19.18■□□□□ 0.66
CSNK1D-215ENST00000580784 SNX8Q9Y5X2 465 aa19.18■□□□□ 0.66
CSNK1D-215ENST00000580784 SETD2Q9BYW2 2564 aaPredicted RBP19.17■□□□□ 0.66
CSNK1D-215ENST00000580784 SMNDC1O75940 238 aaKnown RBP eCLIP19.17■□□□□ 0.66
CSNK1D-215ENST00000580784 CRHP06850 196 aa19.17■□□□□ 0.66
CSNK1D-215ENST00000580784 NGFRP08138 427 aa19.17■□□□□ 0.66
CSNK1D-215ENST00000580784 DDX5P17844 614 aaKnown RBP19.17■□□□□ 0.66
CSNK1D-215ENST00000580784 PRIM2P49643 509 aa19.17■□□□□ 0.66
CSNK1D-215ENST00000580784 CPTPQ5TA50 214 aa19.17■□□□□ 0.66
CSNK1D-215ENST00000580784 NUDCD3Q8IVD9 361 aa19.17■□□□□ 0.66
CSNK1D-215ENST00000580784 FNDC9Q8TBE3 224 aa19.17■□□□□ 0.66
CSNK1D-215ENST00000580784 NINJ1Q92982 152 aa19.17■□□□□ 0.66
CSNK1D-215ENST00000580784 TUBGCP3Q96CW5 907 aa19.17■□□□□ 0.66
CSNK1D-215ENST00000580784 PKNOX2Q96KN3 472 aa19.17■□□□□ 0.66
CSNK1D-215ENST00000580784 NPAS1Q99742 590 aa19.17■□□□□ 0.66
CSNK1D-215ENST00000580784 ZNF395Q9H8N7 513 aaPredicted RBP19.17■□□□□ 0.66
CSNK1D-215ENST00000580784 PLEKHA6Q9Y2H5 1048 aa19.17■□□□□ 0.66
CSNK1D-215ENST00000580784 AP4B1Q9Y6B7 739 aa19.17■□□□□ 0.66
CSNK1D-215ENST00000580784 WDR91A4D1P6 747 aa19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 MSTNO14793 375 aa19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 CTIFO43310 598 aaKnown RBP19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 ITM2AO43736 263 aa19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 LYPLA1O75608 230 aaPredicted RBP19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 CPOXP36551 454 aa19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 KIR2DL2P43627 348 aaPredicted RBP19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 SERPINB4P48594 390 aa19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 POU6F2P78424 691 aaPredicted RBP19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 LASP1Q14847 261 aaKnown RBP19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 PON3Q15166 354 aa19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 KRT71Q3SY84 523 aa19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 BTLAQ7Z6A9 289 aa19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 MREGQ8N565 214 aa19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 OR5P2Q8WZ92 322 aa19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 CDS1Q92903 461 aa19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 COQ8BQ96D53 544 aa19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 CHMP6Q96FZ7 201 aa19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 DACH2Q96NX9 599 aa19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 FOXC2Q99958 501 aa19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 BTBD2Q9BX70 525 aa19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 PARD6BQ9BYG5 372 aa19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 CXorf36Q9H7Y0 433 aa19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 UBQLN4Q9NRR5 601 aa19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 MTORP42345 2549 aa19.16■□□□□ 0.66
CSNK1D-215ENST00000580784 SH3D21A4FU49 640 aa19.15■□□□□ 0.66
CSNK1D-215ENST00000580784 C6orf47O95873 294 aa19.15■□□□□ 0.66
CSNK1D-215ENST00000580784 HPGDP15428 266 aa19.15■□□□□ 0.66
CSNK1D-215ENST00000580784 CCT3P49368 545 aaKnown RBP19.15■□□□□ 0.66
CSNK1D-215ENST00000580784 SIRPAP78324 504 aa19.15■□□□□ 0.66
CSNK1D-215ENST00000580784 ZNF844Q08AG5 666 aa19.15■□□□□ 0.66
CSNK1D-215ENST00000580784 FAM27E3Q08E93 113 aa19.15■□□□□ 0.66
CSNK1D-215ENST00000580784 GGNQ86UU5 652 aa19.15■□□□□ 0.66
CSNK1D-215ENST00000580784 RIMKLAQ8IXN7 391 aa19.15■□□□□ 0.66
CSNK1D-215ENST00000580784 PPP1R14CQ8TAE6 165 aa19.15■□□□□ 0.66
CSNK1D-215ENST00000580784 PGM2Q96G03 612 aa19.15■□□□□ 0.66
CSNK1D-215ENST00000580784 SH3YL1Q96HL8 342 aaPredicted RBP19.15■□□□□ 0.66
CSNK1D-215ENST00000580784 STACQ99469 402 aa19.15■□□□□ 0.66
CSNK1D-215ENST00000580784 KLHDC3Q9BQ90 382 aa19.15■□□□□ 0.66
CSNK1D-215ENST00000580784 OPN3Q9H1Y3 402 aaPredicted RBP19.15■□□□□ 0.66
CSNK1D-215ENST00000580784 PIGUQ9H490 435 aa19.15■□□□□ 0.66
CSNK1D-215ENST00000580784 RNF122Q9H9V4 155 aa19.15■□□□□ 0.66
CSNK1D-215ENST00000580784 DUSP22Q9NRW4 184 aa19.15■□□□□ 0.66
CSNK1D-215ENST00000580784 ATAD3AQ9NVI7 634 aa19.15■□□□□ 0.66
CSNK1D-215ENST00000580784 ZNF175Q9Y473 711 aa19.15■□□□□ 0.66
CSNK1D-215ENST00000580784 HSPA4LO95757 839 aa19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 OPN1LWP04000 364 aa19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 G6PDP11413 515 aa19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 DNASE1P24855 282 aa19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 LCN1P31025 176 aa19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 RPS3AP61247 264 aaKnown RBP19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 TP53BP2Q13625 1128 aa19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 POU4F3Q15319 338 aa19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 CD226Q15762 336 aa19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 SGCBQ16585 318 aa19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 CDC73Q6P1J9 531 aa19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 ZNF474Q6S9Z5 364 aaPredicted RBP19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 METTL25Q8N6Q8 603 aa19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 PSMA8Q8TAA3 256 aa19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 ZBTB9Q96C00 473 aa19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 PRPF18Q99633 342 aaKnown RBP19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 ACTRT3Q9BYD9 372 aa19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 CXXC4Q9H2H0 198 aa19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 HHATLQ9HCP6 504 aa19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 EDARQ9UNE0 448 aa19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 EIF3LQ9Y262 564 aaKnown RBP19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 KCNE3Q9Y6H6 103 aa19.14■□□□□ 0.65
CSNK1D-215ENST00000580784 C2CD3Q4AC94 2353 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms